Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2772 ATGCTTCCTTTCACATACAAAGAGTTCACTATATTATTGACTGAAGATGATGAGAGTATTGGTACTACCAGGGAAAGAGAGTTTAAGGTGGTAATCAAGTTTGCTGCTCGTGTTAGCATGCATCAATTACGTGAGCTTCTCAGTGGGAAACAAGTGGACACACCACAAGAAGCACTTACTGTTATTGACATTGTTCTGAGGGAGCTTGCAGCACAGAGTTACGTGTCCATTGGGAGGTTTCTGTATTCTCCTGATTTTAGAAAACCACAGCAGCTTGGTGGTGGCTTAGAATCATGGCGTGGATTCTACCAAAGTATAAGGCCTACCCAGATGGGTTTATCACTTAATATTGACATGTCATCAATGGCGTTTATTGAGCCACTCCCTGTGATTGACTTTGTTGCTCAAATTTTGGGAAAAGATGTGCACTCAAAGCCATTGTCAGATGCAGATCGTGTCAAGATTAAGAAGGCCCTAAGAGGTGTAAAAGTTGAAGTTACGCATAGAGGGAGTTTTAGAAGGAAGTACAGGATATCAGGATTGACATCACAGCCAACAAGGGAGCTTAACTTCCCTCTTGATGAGAAAATGAACATGAAATCAGTGGTTGATTATTTTCAAGAAATGTATGGATACACTATCAAGTATCCTCATCTACCTTGTCTTCAAGTAGGAAGCCAAAAGAAGGTGAACTATTTGCCAATGGAGGCATGCAAGATAGTTGGAGGCCAGAGGTATACAAAAGGGCTAAACGAAAAGCAGATAACTTCTCTCTTGAAGGTCTCATGCCAGAGACCACGCGAACAAGAGACAGATATTCTTCAGACAATTCAAGAAAATGATTATGAATATAATCCGTATGCGAAAGAGTTTGGTATAAGTGTAGACAGCAAGCTTACATCAGTTGATGCTCGGGTTCTTCCTGCTCCATGGTTGAAATATCATGACACTGGAAGAGAGAAAGAGTACTTGCCACAAGTTGGTCAGTGGAATATGATGAACAAGAAAGTAATAAATGGAAGCACTGTAAGATACTGGGCATGTATCAATTTCTCAAGAAGTGTTCAAGAAAGCACAGCTCGTGGATTTTGCCAACAGTTAGTTCAGATGTGCCAAATCTCAGGCATGGAATTTAGCCAGGACCCTGTGATTCCTGTATATTCAGCAAAACCTGATCTAGTTAAGAAGGCTTTGAAGTATGTACATTCAGCTTCTCTAGAAAATCTTGGTGGCAAGGAGCTAGAGTTGCTTATTGCAATTCTTCCAGACAACAATGGCTCTCTATATGGTGATCTCAAAAGAATCTGCGAAACTGATCTTGGGTTGATTTCTCAGTGTTGTCTTACAAAGCATGTATTCAAGATTAATAGACAGTACTTGGCAAATGTTGCACTCAAAATCAATGTCAAGATGGGAGGAAGGAACACAGTGCTTTTGGATGCTTTAAGTTGGAGGATCCCATTGGTTAGTGACATTCCAACAATAATATTTGGAGCTGATGTAACTCATCCAGAATCCGGAGAGGACTCTTGTCCTTCCATTGCTGCTGTTGTAGCCTCACAGGACTGGCCAGAAGTAACAAAGTACGCAGGATTGGTTTGCGCGCAGCCTCATCGGGAAGAACTCATACAAGATCTTTTTAAATGCTGGAAAGATCCTCATCATGGTGTAGTTTATGGTGGCATGATCAGAGAGCTCTTACTCTCATTTAAGAAGGCAACTGGACAAAAACCACTGAGGATAATATTTTACAGGGACGGGGTAAGCGAAGGACAATTCTACCAAGTTTTGCTATATGAACTTGATGCCATTCGTAAGGCTTGTGCATCTTTGGAACCAAGTTACCAACCTCCAGTAACATTTGTTGTGGTTCAAAAACGTCATCATACTAGACTCTTCTCAAGCAATCATGATGATAGAAATAGCACTGACAAGAGTGGCAATATCTTACCTGGTACTGTGGTTGATTCTAAGATCTGTCATCCTACAGAATTTGACTTCTATTTATGCAGTCATGCTGGAATTCAGGGTACAAGTAGACCAGCTCACTACCATGTCTTATGGGATGAGAACAATTTCACTGCTGATGAAATTCAGTCTCTCACCAACAACTTATGCTACACTTATGCAAGGTGTACAAGATCTGTTTCAGTAGTGCCTCCTGCATACTATGCTCATTTGGCAGCATACCGAGCTCGATTCTACATGGAACCTGGTGCCACTGAGATTTCTAAAGCGCGGGGTGCAAGATCAAAAGATGGTTCAGTTCGGCCACTCCCAGCTCTCAAAGAAAAAGTCAAGAATGTCATGTTCTACTGTTGA 2322 0.4139 MLPFTYKEFTILLTEDDESIGTTREREFKVVIKFAARVSMHQLRELLSGKQVDTPQEALTVIDIVLRELAAQSYVSIGRFLYSPDFRKPQQLGGGLESWRGFYQSIRPTQMGLSLNIDMSSMAFIEPLPVIDFVAQILGKDVHSKPLSDADRVKIKKALRGVKVEVTHRGSFRRKYRISGLTSQPTRELNFPLDEKMNMKSVVDYFQEMYGYTIKYPHLPCLQVGSQKKVNYLPMEACKIVGGQRYTKGLNEKQITSLLKVSCQRPREQETDILQTIQENDYEYNPYAKEFGISVDSKLTSVDARVLPAPWLKYHDTGREKEYLPQVGQWNMMNKKVINGSTVRYWACINFSRSVQESTARGFCQQLVQMCQISGMEFSQDPVIPVYSAKPDLVKKALKYVHSASLENLGGKELELLIAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKINRQYLANVALKINVKMGGRNTVLLDALSWRIPLVSDIPTIIFGADVTHPESGEDSCPSIAAVVASQDWPEVTKYAGLVCAQPHREELIQDLFKCWKDPHHGVVYGGMIRELLLSFKKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPSYQPPVTFVVVQKRHHTRLFSSNHDDRNSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAYRARFYMEPGATEISKARGARSKDGSVRPLPALKEKVKNVMFYC* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2772 773 SMART PAZ_2_a_3 132 264 IPR003100 GO:0005515
Ahy1g2772 773 SMART Piwi_a_2 416 737 IPR003165 GO:0003676
Ahy1g2772 773 CDD PAZ_argonaute_like 127 241 - -
Ahy1g2772 773 Gene3D paz domain 122 246 - -
Ahy1g2772 773 Pfam N-terminal domain of argonaute 4 66 IPR032474 -
Ahy1g2772 773 SUPERFAMILY PAZ domain 123 282 IPR036085 GO:0005515
Ahy1g2772 773 Pfam Argonaute linker 1 domain 76 125 IPR014811 -
Ahy1g2772 773 PANTHER PROTEIN ARGONAUTE 10 2 772 - -
Ahy1g2772 773 SUPERFAMILY Ribonuclease H-like 406 737 IPR012337 -
Ahy1g2772 773 Pfam PAZ domain 132 258 IPR003100 GO:0005515
Ahy1g2772 773 Pfam Argonaute linker 2 domain 270 314 IPR032472 -
Ahy1g2772 773 CDD Piwi_ago-like 286 736 IPR045246 -
Ahy1g2772 773 Gene3D - 306 479 - -
Ahy1g2772 773 Gene3D - 485 773 IPR036397 GO:0003676
Ahy1g2772 773 SMART DUF1785_2 75 127 IPR014811 -
Ahy1g2772 773 Pfam Mid domain of argonaute 325 402 IPR032473 -
Ahy1g2772 773 ProSiteProfiles Piwi domain profile. 416 737 IPR003165 GO:0003676
Ahy1g2772 773 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 2 772 - -
Ahy1g2772 773 ProSiteProfiles PAZ domain profile. 128 242 IPR003100 GO:0005515
Ahy1g2772 773 Coils Coil 773 773 - -
Ahy1g2772 773 Pfam Piwi domain 417 736 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2772 Ahy-Chr1 107558316 107568244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2772 2 773 Eukaryotic Initiation Factors Gene Family AT5G43810 75.769 0.0 1278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2772 K11593 - gmx:100798086 1477.61