Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2771 ATGATTCTCCAGTCTTCAAAATCAAAAGAGATGATCACCGTGAACCAAAACGAAATGGTGGTGGATGAAGGCCTCCTTCACGATATCATGCTTAACTCACCCTCCCTCCACCACCTTCCTCAAACCACGCACTACAATTACAATTACAATTATAACCCCTTTGATGATACTACCGTCTCCTGGATAAACGACGACGTTTCTTCTCCCTCTCAGTCTCAGCTCACTAGCACCGCCCTTCACCTACCACCACCGCCGCCGCCGCCACCACTGATTGATCATCAACAAACGGAGTTGCTGCTGCCAACCGAACAGCAACAGCAAGTGGAAGAAGACTCTGCGATAAGGCTGGTCCACATGCTCATCTCATGCGCCGATTCTCTCCAGCGAGGCCACGTGGCACACGCCGCTTCCCTCATCGACGCCATGCAATCACTCCAAAGACACGTCACCACCGCCTCCGCCATCGGCAAGGTCGCCGCTCACTTCATCGGCGCCTTAACACGCCGCATCTTCGCTCCTCCCCTCACCGACCGCCACGGCGGAGTCGGTGCAGTCGCTAACGACGACGGAGGCGTACTTTACCATCATTTCTACGAGGCATGTCCTTATCTCAAGTTCGCTCACTTCACCGCCAACCAGGCGATCCTCGAGGCCTTCAGCGGCCACTCCTCCGTCCACGTCGTCGACTTCCACCTCGCGCATGGACTCCAGTGGCCGCCGCTCATCCAGGCGCTCGCACTTCGCCCAGGCGGTCCCCCCTCCCTCCGCATCACCGGCATTGGCCCTCCCTCTCCGGACCGCCGCGATGCCCTCCGCGAAACCGGCATCCGCCTCGCCGAACTTGCCCGCTCCGTCAACGTCCGGTTCGCTTTCCGAGGAGTCGCTGCGTCAAGGCTTGAGGACGTGGAGCCGTGGATGCTACAGGTGCGGCAGGAGGAGGCGGTGGCGATCAACTCCGTCATGCAGCTCCACCGACTCCTAGGATCCGATTCGGGAATCGACTCGGTCCTGGGTTGGATCCGGAGGTTAAACCCTAAGATCGTAACCGTGGTTGAACAAGAAGCGAATCATAACCAGACCGGGTTCTTGGAACGATTCACGGAAGCGCTGCATTACTACTCGGCCGTTTTCGACTCGCTAGAGGCTTGCCCAAACGAACCGGATAAGTCGCTAGCCGAAATGTACCTGGAGAGAGAGATTGGCAACGTGGTTTGTTGTGAGGGGCCGGCTCGGGTGGAGAGGCATGAACCGCTGGCCCAATGGAAGGCCCGGTTGGAGAAATCAGGGTTTAAGTGCGTCGGCCTGGGCTCAAATGCGTTACGGCAGGCGAGCATGTTATTGAGCTTGTTCTCAGCTGAGGGGTACTGCGTTGAAGAGAAGGAAGGATGTTTGACTTTGGGTTGGCATGGGAGGCCCCTCATTGCTGCTTCGGCTTGGCAACCCTTTCCCCTCACCCCTGACCCACACCCGCACCCACATTGGCTTCCTTAG 1491 0.5788 MILQSSKSKEMITVNQNEMVVDEGLLHDIMLNSPSLHHLPQTTHYNYNYNYNPFDDTTVSWINDDVSSPSQSQLTSTALHLPPPPPPPPLIDHQQTELLLPTEQQQQVEEDSAIRLVHMLISCADSLQRGHVAHAASLIDAMQSLQRHVTTASAIGKVAAHFIGALTRRIFAPPLTDRHGGVGAVANDDGGVLYHHFYEACPYLKFAHFTANQAILEAFSGHSSVHVVDFHLAHGLQWPPLIQALALRPGGPPSLRITGIGPPSPDRRDALRETGIRLAELARSVNVRFAFRGVAASRLEDVEPWMLQVRQEEAVAINSVMQLHRLLGSDSGIDSVLGWIRRLNPKIVTVVEQEANHNQTGFLERFTEALHYYSAVFDSLEACPNEPDKSLAEMYLEREIGNVVCCEGPARVERHEPLAQWKARLEKSGFKCVGLGSNALRQASMLLSLFSAEGYCVEEKEGCLTLGWHGRPLIAASAWQPFPLTPDPHPHPHWLP* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2771 496 MobiDBLite consensus disorder prediction 65 86 - -
Ahy1g2771 496 Pfam GRAS domain family 116 480 IPR005202 -
Ahy1g2771 496 ProSiteProfiles GRAS family profile. 107 480 IPR005202 -
Ahy1g2771 496 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 90 484 IPR005202 -
Ahy1g2771 496 PANTHER OS05G0574900 PROTEIN 90 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2771 Ahy-Chr1 107555058 107557468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2771 110 480 GRAS Transcription Factor Family AT1G14920 53.209 9.98e-138 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy1g2771 GRAS 6.40E-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2771 K14494 - jre:109006296 563.148