Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2720 ATGGAGTTCACAGAGTGGATTGCACAATGGAAAGATGCAGGTGATGGAATAACCAAGATTGAGTTGGGTCATTCCCTCTCTCCAAAAGGAAACCAATCTTCATCATGGTTATCAAGTTCTGGACATTTTGCATTTGGATTTTACCCTCATGCTCAAGGCTATGGCTATGCTGTTGGTATATGGCTGCTTGGTGAGCCTGACATCACTCTAGTATGGACTGCTAACCGCAACGATCCGCCGCTACCTTCTTCCTCCACCTTACTTTTGACCATTGATGGCTTGGTTCTTCAACAAGGACAAAAGATTACTAATAATGTCACAGGGGCTTCTATGGCATCCATGCTGGATTCCGGAAACTTTGTAATCTATGATGATTCACATGTTGTTGTGTGGCAAAGCTTTGATCATCCAACCGATACCATTTTAGGAGGTCAGAACTTAACTGCAGCAAACAGATTGGTGTCTAGTTTGTCCAAAACAGATCATTCCACTGGACTTTTCTATCTTATCATGCAAGAATCGGATAGCAACCTTGTTGCTTATCCCCTCAAAACCTTACCATACGCTGAGGATCACTACTGGGCTGAGATTGACAATGCTACTACCGGTTCGGTGCAGCTGAGTCTTAACACGGAAGGATTTCTTTGCCTAAGAGAGCATCAATGTTTTGTCAACAACACAAACTTGTTGAAAAATAGCAATTCTCAGAAACAGAACACAACCTCAATATACCGGGCAACATTTGATTTTGATGGGGTTTTCAGATTGTATGAGCACCAATTTGATGGTGAGGGAAATAGAAGGCAATTAAGTGTTCAAATTAGGTGGGAAGCCTTGCATGATAAATGCCAAATCAATGGTTTTTGTGGCTTCAACAGTTACTGCTCCAACACCAATATGTGTCACTGTTATCCTGGTTTCGTCCCCATCAGCAACAATGGCATGTTTCTGGAATGCAAACTGAACTACAGCAAAGACGAATGTCAATCTAATCCTGACCCATCTTCGCTGTACGATGTTACTCTTTTGGAGCACATGTCATGGAGTGATTTCCCATATTTGGTTAAAAAAGAAACAACAATGGAAGCATGTGAGGAATCTTGCAAGGAAGATTGTGATTGTGGGGGAGCATTGTATGCAAATAATGGTGGTATCTGCAGCATATACAGGCTTCCACTCAGATATGGCAGAAAGGTTCCAAATGCATCAGACACAGCCACAGCCATTTTCAAAGTTCCTTATCATTCAGGATTTCTAATTAACCAAACACATCTAGACCCGGATTCCCATGTTGTTGTTGATAACAAGAGAAGCCTAATACTGATTCTATCCTCTTCTTTGGGTTCTGTTACTTTGCTCTGTGTGATCATTGCTGTCTCGGTTTTCTTCAATTATAGGCATCATGTTTATAGTTATGCAAAGTTGTCTGCAAGCTCAAACCTGGGAATCACCAAGGAATGTTCATTGCGCTCGTTTTCCTTTGACGAACTTGTGGAAGCAACTAGTGGCTTCACGGAAGAGATAGGAAGAGGGTCTTATGGAGCAGTTTATAAAGGAACAATAACAGGTGATGGTAGTAACAAAACCGTTGCTGTGAAGAGACTAGAGAGGATTGCTGATGATGAAGGAGAGAGGGAATTCCGAGCTGAAGTTACTGCCATTGCTCGAACTCACCATAGGAATCTGGTTAAGCTTGTTGGGTATTGTATTGAAGGGTCAAGGAAGCTTCTTGTTTATGAATATGTTAGCAATGGCTGCCTCGCGAATCTTCTGTTTAAGGGTAAGAATCATCATCATCATCATCATGATCAGGCACTTCCATGGAAAGAGAGGATTAAAATTGCATTGGATGTAGCCAGAGGAGTGCAGTATCTGCATGAAGAGTGCGGGGTTCGAATCGTCCATTGCAATCTTAAGCCACAAAATATACTGATTGATGAAGCATGGACAGCAAAGATATCTGATTTTGGATTAGCACGGCTTTTGAAGCAGCCTCAACAACCAGAGTTTCTTACTGATGATGAGGTAAGAAGCAGTTACTTGGCACCTGAATGGAAGAATGAGGCATCACCATCTTTATCTTCATGTTCATCTCCATTGGTGTCTGTGAAAGTTGATATTTACAGCTATGGGGTTGTGGTGTTGGAGATAGTGTGCCGCAGAAGAAGTATAGATGTAAACGTGAAGTGTCCAGAGGAGGTTCTTCTTTCAAGTTGGGTGTATCAGTGTTATGCAGAAGGAGAGTTGAGGAAGCTTGTTGTTAATGAATCAGAAGAAGAGGATACAGATTGGAAGACATTAGAGAGAATGGTGAAGGTGGGGTTGTGGTGTGTGCAGGATGATCCATCACTGCGTCCTTCAATGAAGAATGTTATCTTGATGTTGGAAGGTTGGAAACCTATTCCAACTCCTCCATCTCCTCTTGCTTCAACTTAA 2436 0.42 MEFTEWIAQWKDAGDGITKIELGHSLSPKGNQSSSWLSSSGHFAFGFYPHAQGYGYAVGIWLLGEPDITLVWTANRNDPPLPSSSTLLLTIDGLVLQQGQKITNNVTGASMASMLDSGNFVIYDDSHVVVWQSFDHPTDTILGGQNLTAANRLVSSLSKTDHSTGLFYLIMQESDSNLVAYPLKTLPYAEDHYWAEIDNATTGSVQLSLNTEGFLCLREHQCFVNNTNLLKNSNSQKQNTTSIYRATFDFDGVFRLYEHQFDGEGNRRQLSVQIRWEALHDKCQINGFCGFNSYCSNTNMCHCYPGFVPISNNGMFLECKLNYSKDECQSNPDPSSLYDVTLLEHMSWSDFPYLVKKETTMEACEESCKEDCDCGGALYANNGGICSIYRLPLRYGRKVPNASDTATAIFKVPYHSGFLINQTHLDPDSHVVVDNKRSLILILSSSLGSVTLLCVIIAVSVFFNYRHHVYSYAKLSASSNLGITKECSLRSFSFDELVEATSGFTEEIGRGSYGAVYKGTITGDGSNKTVAVKRLERIADDEGEREFRAEVTAIARTHHRNLVKLVGYCIEGSRKLLVYEYVSNGCLANLLFKGKNHHHHHHDQALPWKERIKIALDVARGVQYLHEECGVRIVHCNLKPQNILIDEAWTAKISDFGLARLLKQPQQPEFLTDDEVRSSYLAPEWKNEASPSLSSCSSPLVSVKVDIYSYGVVVLEIVCRRRSIDVNVKCPEEVLLSSWVYQCYAEGELRKLVVNESEEEDTDWKTLERMVKVGLWCVQDDPSLRPSMKNVILMLEGWKPIPTPPSPLAST* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2720 811 Pfam D-mannose binding lectin 69 150 IPR001480 -
Ahy1g2720 811 SMART blect_4 27 137 IPR001480 -
Ahy1g2720 811 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 18 808 - -
Ahy1g2720 811 ProSitePatterns Protein kinases ATP-binding region signature. 508 533 IPR017441 GO:0005524
Ahy1g2720 811 Gene3D Transferase(Phosphotransferase) domain 1 582 801 - -
Ahy1g2720 811 SUPERFAMILY alpha-D-mannose-specific plant lectins 57 181 IPR036426 -
Ahy1g2720 811 Gene3D Phosphorylase Kinase; domain 1 477 581 - -
Ahy1g2720 811 ProSiteProfiles Protein kinase domain profile. 502 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g2720 811 PIRSF SRK 7 811 IPR024171 GO:0004674
Ahy1g2720 811 CDD STKc_IRAK 508 797 - -
Ahy1g2720 811 PANTHER S-RECEPTOR KINASE-LIKE PROTEIN 18 808 - -
Ahy1g2720 811 Gene3D - 19 135 IPR036426 -
Ahy1g2720 811 Pfam PAN-like domain 343 389 IPR003609 -
Ahy1g2720 811 Pfam Protein tyrosine and serine/threonine kinase 504 793 IPR001245 GO:0004672|GO:0006468
Ahy1g2720 811 Gene3D - 138 278 IPR036426 -
Ahy1g2720 811 SUPERFAMILY Protein kinase-like (PK-like) 485 798 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2720 Ahy-Chr1 106609593 106612865 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2720 399 808 Receptor kinase-like Gene Family AT4G18250 32.933 6.78e-60 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Ahy1g2720 PK_Tyr_Ser-Thr 8.30E-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2720 - - ahf:112707637 1595.48