Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2701 ATGTACGACATTGCATATGACGTGAGTGAGCATTCTAATTCCACCGACGTTAATAATCCGTCTTTGAGTGAAGATGACACACCACTTGTGGAACAAGTATTATCAAAAGATACATGGTTATTGGAAGTGTTTTTATTTGTCGAATGGTCGATGTTTATCTTGTTTCGTGATATGTCCTCGGTTATCAATTCTAGGAGAAAGAATCTGAAGACGTTATTCAAAAGAAAGGATGATGCTATGACAATTAATAATGAGTTGTCGGATCACACTGGAATTCCAATAGAGAAAATCCCATACGTAGGATTGAGATTTGATTCATTACAGTGGGCACAAGAGTTCTATTCTAATTATGTAAAAAAAGTTTGGTTTGTGACTAGGATTAGGAATACCAACTTTGACAAGACCATGAAGGAATTAAAGGTACCTATTAACCAATCGATACATTGCAGTCGTGAAGATTATCGGGAGTCTCGAGTGAAGGCAGCAACGCGGGTAAAGAGAATAACAACAGCCGGATGCAAAACAAGGATGTGTGTGATGCTTGATAAGCAGAACGATAATTGGATGGTGTCCAAATTAGAATTGAAGCACACTCACACGTGTTTTGCCAAGCAAGTTGTGCATTACAGTGAGTACAGGGAACTGACCATGCATGCCAAGATTGTGATTCAGAACAACGATGAGGCTAGCATACGGCCCAACAAGACTTATCTCGCACTGGCGAACGAGGTTGGTGGGTCATCAAAGTTGGGTTACTTAGAAACGGATGTGAGGAACAACATAATGAGGAATCTGCGATGTGCTTACATAAATGCAGATGTGAAGGAAATGATTATCTATTTCATGCGAATGAGAGATATAAACTCGAATTTCTTTTATGCAGTTGATGTGGACGAAACTAACAAGTTTAAGAGTGCGCTATGGGTAGATGCAATATGCAGGGCGTCCTATGAATATTTTAGAGATGTGGTATCGTTTGATACAACGTACAGTAGAAACAAGTATGGACTTCCGTTTGCATCTTTCGTTGGTGTTAACCATCACGGAAAGTCCACTCTAATTGGATCTGCTTTGTTGGAAAATGAGAAAATTCGTAGCTTTGAGTATGTCTTTAAACAATGGTTGAAGTGCATGGGAACTCCCCCACAAGCCATCATTACGGACCAGTGCAAATCCATGTTTGGCACTATTAGGAATGTCTTCCTAGATACTAGACACTGA 1221 0.3972 MYDIAYDVSEHSNSTDVNNPSLSEDDTPLVEQVLSKDTWLLEVFLFVEWSMFILFRDMSSVINSRRKNLKTLFKRKDDAMTINNELSDHTGIPIEKIPYVGLRFDSLQWAQEFYSNYVKKVWFVTRIRNTNFDKTMKELKVPINQSIHCSREDYRESRVKAATRVKRITTAGCKTRMCVMLDKQNDNWMVSKLELKHTHTCFAKQVVHYSEYRELTMHAKIVIQNNDEASIRPNKTYLALANEVGGSSKLGYLETDVRNNIMRNLRCAYINADVKEMIIYFMRMRDINSNFFYAVDVDETNKFKSALWVDAICRASYEYFRDVVSFDTTYSRNKYGLPFASFVGVNHHGKSTLIGSALLENEKIRSFEYVFKQWLKCMGTPPQAIITDQCKSMFGTIRNVFLDTRH* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2701 406 Pfam FAR1 DNA-binding domain 112 202 IPR004330 -
Ahy1g2701 406 Pfam MULE transposase domain 323 406 IPR018289 -
Ahy1g2701 406 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 73 406 IPR031052 GO:0006355
Ahy1g2701 406 MobiDBLite consensus disorder prediction 1 25 - -
Ahy1g2701 406 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 73 406 - -
Ahy1g2701 406 MobiDBLite consensus disorder prediction 8 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2701 Ahy-Chr1 106295296 106296949 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy1g2701 FAR1 4.00E-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2701 - - ahf:114927550 582.793