Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2689 ATGGAAGCCAGATTTGGGGGAAAGAATCAGTTTTTATATGGAGCTGTGGTTCCAGAAATGAAAGGTGTTGGGAAGAGGAGTTTGGAGTGGGATTTGAACGATTGGAGATGGGACGGTGATCTCTTCACTGCTCAACAACTCAATTCGGTTCCATCAGATTGTAGAAGCCGCCAATTTTTCCCACCAAATCCTGAGATTCATGCAAATAATAATGCTATTAATGCATCTAACAGTATCTCTTCTTCAATCAACCCTGTTGAAGAAGGGAAGAGAGAGTTGGAGAAGAAGAGAAGAGCTGTTGTAATAGGTGAAGGCGAAGAAAGGGAGGAGCTGAATGATGAAGGAGGAGGAGGAGGTGGTGGTGGTAGTTCTCTTAATTTGAATCTTGGAGCTCAGGTTTACCCAATCATGGTGGAAGGGGATGAGAAAAGTGGAAAGAAGACAAAGGTAGTAGAGACAGCTGCTACAACTTCTAACCGTGCAGTTTGTCAGGTACAAGATTGTAGGGTTGATCTTAGTGGTGCAAAGGATTACCACCGTCGACATAAAGTTTGTGATGTGCATTCTAAAGCTACTAAGGCCCTTGTGGGAAATGTTATGCAGCGGTTTTGTCAACAGTGTAGCAGGTTTCATGCGCTTGAGGAGTTTGATGAAGGGAAGCGGAGTTGTCGTAGGCGTCTGGCAGGCCACAATAGGAGGAGGAGGAAAACGCATCCTGATGCAGCTGGAGTTAATGGAGGTTCTCTGAATGGTGAAAGGGGTAGTAGCTATCTGTTGATGAGTTTGTTACGGATACTGTCCAATATGCATTCAAACGGGTCAGATAATACAAGGAACCAGGATATTCTCTCTCATCTACTGGGGAACCTGGCAAATCTGGCGGGTACACTTAATGAAAGAAGTATAGCCTCTTTGCTGGAGGGATCTCAAGGTTTGGTAAATTCTAGGACACCTGAAGCTGCGCTCAATGTGCCAAATCTTAATTCAAATGGTCCTGAAGCCTCAAGGCCTTCTGGTTCTCCCATCAAGACGGGTAATGGTGCCATCCGGCAGGATCCTCCAAGGTCTATGGTACAGTGTGAGGCAGCACCTTTGAATGCTGTCACAGAGAAATGCGTACCTTTAAGTCATGGTGCAGTGGCAAAGTTGAAACCTTCGGGAATCCAGCCCTCCTCAAATGTACTTCTATCGAGGGATAGCCAACCATCCCAGTTAATTGCAGCAGATACTAGCGTTGGAAGGGATCACTTAAATAACATCGACCTGAATAATGTATATGATGATACACAGGATTGTGCCGAGAATCCTAAGTCGTCTTCTGCTCCCGTGGGAGAGGTTAGGTCTCTTGATCATCCTTTGTGGTTGCAATGTAACTCTCTCAAATCAAGTCCACCGCAGACAAGTATAAACTCAGATTCAACCTCCACCCAGTCACCATCTAGTTCTAGTGGAGAAGCTCAGTCTCGCACAGATCGAATAGTTTTCAAACTCTTTGGCAAGGATCCAAGTGATTTTCCCCATGTTCTCCGATCACAGATCCTCAATTGGTTATCACACAGTCCTACCGAGATTGAGAGCTATATAAGGCCAGGCTGTATCGTATTAACAATATATCTCCGCCTCGAGAAATCTGCATGGGAGGAGCTCTCCTGTAACCTCGGATCCAGCTTGAGCAAGCTTGCTTCAAATGATTCTTTCTGGACAACAGGTTGGGTATATACAAGGGTGCAACAATCTGTAGCTTTTTTGTATAACGGCCAAGTTGTCTTAGACGTGCCGTTGCATCTTAGAAGCCCACAGAATTGTAGGATTTCATGCATTAAACCACTTGCTGTTCCTAAAAATGCAAATGCTAAGTTTACTGTGAAAGGGTTCAACCTTTTCAGATCCAGCACAAGGATGCTTTGTGCTTTTGAAGGGAAGTATCTGGTACATGATAGTTCTCATGATTTGATTGATGTAGCCGATGTATCCGATGCAGCTATCCAACATCTCAGCTTCTCTTGTCAAATACCAAATGTAACTGGCAGGGGGTTTGTTGAGGTGGAAGATCATGGTCTTAGCAGCTGTTCCTTTCCATTTATAGTCGCAGAGCAAGAAATTTGTACAGAGATCTGCAAGCTGGAGAATGTGATTGAGGCGGCAGATGCCACTGATGACGTCTTGTTAAAGAGCAAACAAATAGAAGAAAAGACTCGAGCTCTGGAATTCTTACAAGAAATGGGTTGGCTTCTTCATAGAAGTCGTTTGAATGTTAGGCTAGGTACCCTGGCGCCTACTCAGGATCCCTTTCATTTCAGTCGGTTCGTGTGGCTTGTTGATTTCTCCATGGACCATGATTGGTGTGCAGTGGTGAAAAAACTCTTGGACATTATATTTGAGGATGGTGTTGATGTAGGAGATCATACCTCCATCGAGCTCGCGTTATTGGACATGGGTCTTCTACACAAAGCTGTGAAGAGAAATTCAAGGCCTATGGTGGAACTATTGTTAAAATTTGTGCCTACGAAAAGTTCAGCTGGGGCAGCAAAATTCTTATTTAGACCTGATAATGTTGGGCCGGCAGGGTTAACTCCACTTCATGTCGCAGCAAGCATGAAAGGCTCTGAGAATGTCTTGGATGCATTAACTGATGATCCAGGAATGGTTGGAATTGAAGCATGGAAAAGTGCTAGGGACAATACAGGCTTGACGCCTAACGATTATGCAAGCCTCCGCGGCTATTTCTCCTACATTCAACTTGTCCAGAAGAACACCAACAAAAGGCGCGAAGGACAACATGTGCTTGATATCCCTGGCGCCATTGTAGACAGTAACACAAAGCAGAAGCAACTAGATGTGAACAGGACATCTAAGCTTGCAAGTTTGCACACCGAGAAGCTCGAAACCACAGTGATGGCGAGTCAATGCGGGATATGCCAGCACAGGCTGGCTTATGGCGGCACAAGAGCGGCACTGGTTTATCGGCCGGCGATGCTCTCACTTGTGGCCATTGCAGCTGTTTGTGTATGTGTGGCATTGCTCTTCAAAAGCTCACCTAAAGTTTATTATGTCTTCCAGCCTTTCAACTGGGAATCACTGGGATATGGTTATATCTAA 3099 0.4501 MEARFGGKNQFLYGAVVPEMKGVGKRSLEWDLNDWRWDGDLFTAQQLNSVPSDCRSRQFFPPNPEIHANNNAINASNSISSSINPVEEGKRELEKKRRAVVIGEGEEREELNDEGGGGGGGGSSLNLNLGAQVYPIMVEGDEKSGKKTKVVETAATTSNRAVCQVQDCRVDLSGAKDYHRRHKVCDVHSKATKALVGNVMQRFCQQCSRFHALEEFDEGKRSCRRRLAGHNRRRRKTHPDAAGVNGGSLNGERGSSYLLMSLLRILSNMHSNGSDNTRNQDILSHLLGNLANLAGTLNERSIASLLEGSQGLVNSRTPEAALNVPNLNSNGPEASRPSGSPIKTGNGAIRQDPPRSMVQCEAAPLNAVTEKCVPLSHGAVAKLKPSGIQPSSNVLLSRDSQPSQLIAADTSVGRDHLNNIDLNNVYDDTQDCAENPKSSSAPVGEVRSLDHPLWLQCNSLKSSPPQTSINSDSTSTQSPSSSSGEAQSRTDRIVFKLFGKDPSDFPHVLRSQILNWLSHSPTEIESYIRPGCIVLTIYLRLEKSAWEELSCNLGSSLSKLASNDSFWTTGWVYTRVQQSVAFLYNGQVVLDVPLHLRSPQNCRISCIKPLAVPKNANAKFTVKGFNLFRSSTRMLCAFEGKYLVHDSSHDLIDVADVSDAAIQHLSFSCQIPNVTGRGFVEVEDHGLSSCSFPFIVAEQEICTEICKLENVIEAADATDDVLLKSKQIEEKTRALEFLQEMGWLLHRSRLNVRLGTLAPTQDPFHFSRFVWLVDFSMDHDWCAVVKKLLDIIFEDGVDVGDHTSIELALLDMGLLHKAVKRNSRPMVELLLKFVPTKSSAGAAKFLFRPDNVGPAGLTPLHVAASMKGSENVLDALTDDPGMVGIEAWKSARDNTGLTPNDYASLRGYFSYIQLVQKNTNKRREGQHVLDIPGAIVDSNTKQKQLDVNRTSKLASLHTEKLETTVMASQCGICQHRLAYGGTRAALVYRPAMLSLVAIAAVCVCVALLFKSSPKVYYVFQPFNWESLGYGYI* 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2689 1032 ProSiteProfiles Zinc finger SBP-type profile. 160 237 IPR004333 GO:0003677
Ahy1g2689 1032 Gene3D - 782 931 IPR036770 -
Ahy1g2689 1032 MobiDBLite consensus disorder prediction 227 249 - -
Ahy1g2689 1032 Pfam SBP domain 163 236 IPR004333 GO:0003677
Ahy1g2689 1032 PANTHER TRANSCRIPTION FACTOR SBP FAMILY-RELATED 13 1031 - -
Ahy1g2689 1032 MobiDBLite consensus disorder prediction 322 353 - -
Ahy1g2689 1032 SUPERFAMILY SBT domain 161 241 IPR036893 GO:0003677|GO:0005634
Ahy1g2689 1032 MobiDBLite consensus disorder prediction 322 345 - -
Ahy1g2689 1032 Gene3D - 154 224 IPR036893 GO:0003677|GO:0005634
Ahy1g2689 1032 MobiDBLite consensus disorder prediction 461 488 - -
Ahy1g2689 1032 SUPERFAMILY Ankyrin repeat 812 916 IPR036770 -
Ahy1g2689 1032 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 13 1031 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2689 Ahy-Chr1 106136961 106142974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2689 1 1030 SBP-box Gene Family AT3G60030 46.616 0.0 803
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Ahy1g2689 SBP 5.80E-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2689 - - gmx:100776125 1411.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2128 11 133345660 133351709 Ahy1g2689 1 106136961 106142974 hybridization