Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2676 ATGAAAATGGAAGGTAATGATACTGCGAGTTCTTCGAAAGTAGCAGGCCCTGAGATGAATCAAGATCCAAAGAAGGGAAAGGAGAAAGATGAAGGAAAAGACACAGTGCCATTGTACAAGCTTTTCTCATTTGCTGATCGGTTAGATCGTTTGTTGATGCTTGTTGGAACAGTTGGTGCTATTGGTAATGGAATCTCCATGCCATTAATGACTCTAATATTTGGGAATATGATCAATGCATTTGGAGGAAACTCAAACACCAAAGAAGTTGTTGATGAAGTTTCCAAGGTGTCACTGAAATTTGTGTACTTGGCTGTGGGAACCTTTTTCGCATCACTCATGCAGGTGGCTTGTTGGATGGTTACTGGGGAGAGACAGGCAGCACGAATCAGAGGCTTATACCTTCAAACAATCTTGAGGCAGGATGTTAGCTTCTTCGACAAGGAAACGAATACCGGCGAGGTTGTTGGAAGGATGTCCGGCGATACTGTTCTTATTCAAGACGCCATGGGAGAGAAGGTAGGGCAGTTTATACAGTTGATGGCAACATTCGTTGGAGGTTTTATCATAGCATTTGTCAGAGGATGGCTTCTATCAGTTGTCATGCTCTCTTCTATTCCACTTCTTGTGATGTCTGGTGCTGTAATGACCCTGGTTATTCAAAAAACATCTTCTCGCGGACAAACAGCTTATTCTGCTGCAGCAAGCGTAGTAGAGCAGACTATAGGCTCCATTCGAACGGTTGCATCATTCACTGGGGAGAAACAAGCTGTAATTAAGTATAATCAGTCACTAATCAAAGCTTACAAGACCGGTTTGCAAGAGGCCCTGGCTTCTGGTTTCGGTTTTGGCGTACTGTATTTTGTTATAATTTCTACTTATGGTTTGGCTATATGGTATGGCGCCAAAATGGTAATCGAGAAAGGATATAATGGAGGCGAGGTTATCACTGTAATCTTTGCTCTATTGACCGGATCCATGTCTCTTGGTCAGGCATCGCCGAGCCTAAGCGCGTTTGCTGCAGGGCAAGCGGCGGCGTTTAAGATGTTTGAAACAATTAAAAGGAAGCCGGAAATCGATGCTTCTGATCCCAACGGTCTAAAGCTCGACGACATTCGTGGAGACATAGAGCTTAGGGAGGTCTGCTTTAGTTATCCTACAAGGCCGGATGAACTGATATTCAATGGATTTTCGCTTTCGATACCGAGTGGAACTACTGCAGCTCTGGTGGGACAAAGTGGGAGTGGGAAATCAACAGTTGTTAGTTTGATTGAGAGATTCTACGATCCACAGGCTGGTGAAGTTCTCATTGATGGTATCAACCTCAAAGAATTTCAGCTTAAGTGGATCAGGCAGAAAATTGGCCTAGTTAGCCAGGAACCAGTTCTCTTTGCTAGTAGCATTAAAGAGAACATTGCTTATGGAAAAGACGGTGCAACCGATGAAGAAATCCGAGCCGCAGCAGAACTCGCCAATGCTGCAAAATTCATAGATAAGCTTCCTCAGGGATTGGATACAATGGTTGGTGAGCATGGAACTCAGCTCTCAGGAGGACAAAAGCAGAGAGTTGCAATAGCAAGAGCGATTTTGAAAGATCCAAGAATCTTACTTCTTGATGAAGCTACAAGTGCGCTTGATGCCGAATCTGAGAGGATAGTACAGGAGGCATTGGACAGAATAATGGTAAACCGAACAACTGTCATTGTCGCGCATCGTCTAAGTACTATAAGAAACGCTGATGCCATTGCTGTTATTCATCAAGGAAAAATAGTAGAAAGAGGTTCGCATGCTGAGCTCACGCGTGATCCTGAGGGGGCCTATAGCCAGTTAATTAGGCTGCAAGAAGTTAAAGGCGCAAATCACAAAGACAAACCAGAAAGTATTTTGCATTCTGGAAGAATCTCGAGTCATCGATCTTCTTCTATAAGATCTCTAAGCCATCAAGAATCATTCGGAATTGGAAACAGCGGCCGCCACTCATTGACAGCACCGTTTCCGGTTCCTACAGCAGTTGGCATCACGGAATTGCCACCTGAAGCTCCTACTTCTTCAACTGTCTCACCTCCGCCACCGGAAGTTCCTCTTCTTCGCCTCGCTTCTCTAAACAAGCCTGAGATTCCAGTCTTATTCATGGGATCAGTAGCTGCAGTGATAAGTGGCTTGATATTTCCAGCTTTCGGCCTAGTGCTTTCGAAAATGATCACAATTTTCTATGAACCGGCTCATAAGCTTCGCCACGATTCTAGAATTTGGGCACTGGTGTTTGTTGGACTTGGAGCACTATCATTGTTTGTGTACCCTTCTAGATTCTACCTTTTCGCCGTCGCCGGTGGTAAGTTGATCAAGAGGATCCGGGAGATATGTTTCGAGAAAGTGGTCAATATGGAGGTGAGCTGGTTCGACGAAGCTGATCATTCAAGCGGAGCGATTGGTGCTAGGCTTGCTACTGATGCTGCTTCGATCCGAGCTATAGTCGGGGATGCACTTGGATTGATGGTTGAAAACATTGCTACAGCAGTTTCTGCCTTGGTGATTTCTTTTGATGCCTGCTGGCAACTTGCTCTTATAGTTCTCGCTTTGGCGCCTTTGTTGGGGCTAAATGGATATGTGCAGTTCAAGTTCTTGACAGGATTCAGCTCTGATGCAAAGAAATTATATGAGGAAGCAAGTCAAGTGGCAAATGATGCTGTAGGGAGTATTAGAACAGTTGCTTCCTTCTGTGCTGAAGAGAAGGTGATGGACTTATACCGCGAAAAATGCGAAGGACCGATCAAGACAGGGATAAGAAAGGGAATAATCAGTGGTATAGGTTTTGGAGTATCATTCTTCATGATGTATTGTGTTTATGCAACTAGCTTCTATGCCGGAGCTCGTCTCGTGGATGATGGAAAATCAACATTCTCAGATGTCTTCAGAGTCTTCTTTGCTCTCAGCATGGCAGCTATTGGAATCTCTCAATCCAGCTCCTTAGTCCCTGACTCAACCAAAGCGAAAAGCGCTGCAGCATCTATATTCGCCATTCTTGATCGAAAGTCGCGAATAGACCCCAGTGAGGAATCTGGATTAACACATGAAGTTAAGGGAGAAATTGAGCTTCACCATGTCAGTTTCAAGTATCCAACTAGGCCTGATGTTCAAATATTCCGCAATCTTAGCTTGACAATTCGTAGTGGCAAGACAGTTGCACTGGTTGGAGAAAGTGGAAGTGGAAAGTCAACAGTGATAGCATTGCTACAAAGATTTTATGACCCTGATTCAGGTCACATTACACTTGATGGAAATGATATCCAAACACTTCAAGTTAAGTGGCTAAGACAACAGATGGGTTTGGTTAGCCAAGAGCCTGTTTTGTTCAACGACACGATCCGAGCCAACATCGCATATGGAAAAGGAGGAGATGCAACAGAAGCAGAAATCATAGCTGCAGCAGAACTTGCTAATGCTCACAAGTTCATTAGTAGTTTGCAGCAGGGTTATGACACGATAGTAGGCGAGCGTGGCGTCCAATTATCCGGTGGCCAGAAGCAGCGAGTGGCGATTGCAAGAGCCATAGTTAAGAATCCCAAGATATTGCTTCTAGATGAAGCAACAAGTGCACTTGATGCTGAGTCTGAGAAAGTGGTTCAGGATGCACTTGACAGGGTTATGGTGGACAGAACCACCATTGTGGTGGCACATAGGCTATCTACAATCAAAGGTGCTGATTTGATTGCAGTAGTTAAGAATGGTGCTATTGCAGAGAAGGGTAAGCATGAAGCTTTGCTCAATAAGGGAGGTGACTATGCTTCATTGGTAGCATTGCACACAAGTGCTTCATCTTAG 3822 0.4451 MKMEGNDTASSSKVAGPEMNQDPKKGKEKDEGKDTVPLYKLFSFADRLDRLLMLVGTVGAIGNGISMPLMTLIFGNMINAFGGNSNTKEVVDEVSKVSLKFVYLAVGTFFASLMQVACWMVTGERQAARIRGLYLQTILRQDVSFFDKETNTGEVVGRMSGDTVLIQDAMGEKVGQFIQLMATFVGGFIIAFVRGWLLSVVMLSSIPLLVMSGAVMTLVIQKTSSRGQTAYSAAASVVEQTIGSIRTVASFTGEKQAVIKYNQSLIKAYKTGLQEALASGFGFGVLYFVIISTYGLAIWYGAKMVIEKGYNGGEVITVIFALLTGSMSLGQASPSLSAFAAGQAAAFKMFETIKRKPEIDASDPNGLKLDDIRGDIELREVCFSYPTRPDELIFNGFSLSIPSGTTAALVGQSGSGKSTVVSLIERFYDPQAGEVLIDGINLKEFQLKWIRQKIGLVSQEPVLFASSIKENIAYGKDGATDEEIRAAAELANAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRVAIARAILKDPRILLLDEATSALDAESERIVQEALDRIMVNRTTVIVAHRLSTIRNADAIAVIHQGKIVERGSHAELTRDPEGAYSQLIRLQEVKGANHKDKPESILHSGRISSHRSSSIRSLSHQESFGIGNSGRHSLTAPFPVPTAVGITELPPEAPTSSTVSPPPPEVPLLRLASLNKPEIPVLFMGSVAAVISGLIFPAFGLVLSKMITIFYEPAHKLRHDSRIWALVFVGLGALSLFVYPSRFYLFAVAGGKLIKRIREICFEKVVNMEVSWFDEADHSSGAIGARLATDAASIRAIVGDALGLMVENIATAVSALVISFDACWQLALIVLALAPLLGLNGYVQFKFLTGFSSDAKKLYEEASQVANDAVGSIRTVASFCAEEKVMDLYREKCEGPIKTGIRKGIISGIGFGVSFFMMYCVYATSFYAGARLVDDGKSTFSDVFRVFFALSMAAIGISQSSSLVPDSTKAKSAAASIFAILDRKSRIDPSEESGLTHEVKGEIELHHVSFKYPTRPDVQIFRNLSLTIRSGKTVALVGESGSGKSTVIALLQRFYDPDSGHITLDGNDIQTLQVKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIIAAAELANAHKFISSLQQGYDTIVGERGVQLSGGQKQRVAIARAIVKNPKILLLDEATSALDAESEKVVQDALDRVMVDRTTIVVAHRLSTIKGADLIAVVKNGAIAEKGKHEALLNKGGDYASLVALHTSASS* 1274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2676 1273 CDD ABC_6TM_Pgp_ABCB1_D1_like 53 337 - -
Ahy1g2676 1273 Pfam ABC transporter 395 543 IPR003439 GO:0005524
Ahy1g2676 1273 Gene3D ABC transporter type 1, transmembrane domain 99 1005 IPR036640 GO:0005524|GO:0016021
Ahy1g2676 1273 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1023 1267 IPR027417 -
Ahy1g2676 1273 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 54 341 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy1g2676 1273 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 710 996 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy1g2676 1273 Pfam ABC transporter 1049 1198 IPR003439 GO:0005524
Ahy1g2676 1273 ProSitePatterns ABC transporters family signature. 515 529 IPR017871 GO:0005524
Ahy1g2676 1273 MobiDBLite consensus disorder prediction 1 32 - -
Ahy1g2676 1273 Pfam ABC transporter transmembrane region 53 327 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy1g2676 1273 Pfam ABC transporter transmembrane region 709 979 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy1g2676 1273 MobiDBLite consensus disorder prediction 1 17 - -
Ahy1g2676 1273 SMART AAA_5 1057 1244 IPR003593 -
Ahy1g2676 1273 SMART AAA_5 403 596 IPR003593 -
Ahy1g2676 1273 MobiDBLite consensus disorder prediction 621 641 - -
Ahy1g2676 1273 SUPERFAMILY ABC transporter transmembrane region 40 360 IPR036640 GO:0005524|GO:0016021
Ahy1g2676 1273 CDD ABC_MTABC3_MDL1_MDL2 376 614 - -
Ahy1g2676 1273 Gene3D - 374 633 IPR027417 -
Ahy1g2676 1273 PANTHER - 20 1270 - -
Ahy1g2676 1273 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 376 612 IPR003439 GO:0005524
Ahy1g2676 1273 SUPERFAMILY ABC transporter transmembrane region 697 1011 IPR036640 GO:0005524|GO:0016021
Ahy1g2676 1273 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 20 1270 - -
Ahy1g2676 1273 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1030 1267 IPR003439 GO:0005524
Ahy1g2676 1273 CDD ABC_MTABC3_MDL1_MDL2 1030 1265 - -
Ahy1g2676 1273 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 365 614 IPR027417 -
Ahy1g2676 1273 ProSitePatterns ABC transporters family signature. 1170 1184 IPR017871 GO:0005524
Ahy1g2676 1273 Gene3D - 1021 1272 IPR027417 -
Ahy1g2676 1273 CDD ABC_6TM_Pgp_ABCB1_D2_like 699 1014 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2676 Ahy-Chr1 105827321 105832944 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2676 677 1271 Calmodulin-binding Proteins AT2G36910 40.198 2.44e-131 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2676 K05658 - gmx:100800293 1962.96