Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2669 ATGTTACCCACCACCCAGAAATTTGGTTTTGATGTTAAGAATGAAATGAGTAAGCACATAGCATCACAAGAAGCAAAAATATTGGAGGATCAAGTACCATCATTTGAAGCTTCTTGCAAGAAAGCTAGAGTGTCCATAAGAGCAAGATCAAATTTTTCTATGATGGTTGATGGGTGCCAATGGAGAAAATATGGACAAAAAACATCAAAGGGCAATCCTTGTCCTCGAGCCTACTATCGTTGTAGCATGGGACAAACATGTCCAGTTCGTAAGCAGGTGCAAAGATGCGCAATGGATGAGAGAGTTGTGATAACAACGTACGAGGGGAATCACAATCATCCACTCCCAGAAGCAGCAAGATCCATAGCCACCACAACAACATCAGCATTGAACATGTTCCTATGTGGCTCCATGACCACCACCACAACTAGTAGTACTTCACTTTCACTATCTTCCACTTCATCATCATCATGTCCTACTCTAACACTCGACTTAACTACTCAACAACCCTCCAATGATATTATTGCATCAAAGCACACACAACAACCATTACTATTCCCTCTGCCTCTAAATGCTTGCTATACTCAAGAAAACAACCTTGCCTTGGTGGATCTTGTTACTGCAGCTTTAACCAACGATCCTTCTCTTAAGGAAGCATTACTTGCAGCTTTTTCCTCTCTCACTCACAATAATGAACATGTTTAG 705 0.4113 MLPTTQKFGFDVKNEMSKHIASQEAKILEDQVPSFEASCKKARVSIRARSNFSMMVDGCQWRKYGQKTSKGNPCPRAYYRCSMGQTCPVRKQVQRCAMDERVVITTYEGNHNHPLPEAARSIATTTTSALNMFLCGSMTTTTTSSTSLSLSSTSSSSCPTLTLDLTTQQPSNDIIASKHTQQPLLFPLPLNACYTQENNLALVDLVTAALTNDPSLKEALLAAFSSLTHNNEHV* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2669 234 Pfam WRKY DNA -binding domain 57 114 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy1g2669 234 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 22 231 IPR044810 GO:0003700
Ahy1g2669 234 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 22 231 - -
Ahy1g2669 234 SUPERFAMILY WRKY DNA-binding domain 49 116 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy1g2669 234 SMART WRKY_cls 55 115 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy1g2669 234 Gene3D WRKY domain 39 117 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy1g2669 234 ProSiteProfiles WRKY domain profile. 50 116 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2669 Ahy-Chr1 105746684 105748505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2669 3 166 WRKY Transcription Factor Family AT4G04450 50.265 1.12e-53 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy1g2669 WRKY 4.30E-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2669 - - ahf:112722714 385.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2167 11 134185861 134188123 Ahy1g2669 1 105746684 105748505 hybridization