Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2664 ATGGAAGAAATGGTGATGGCAACATTGGACCTAATAACTGCATCTCCTCATTCATCTTCATCTTCTTCATCTTCACCCACCACTGATAATAATAACAACCACCCTTCTTCTTCTTCTTCTTCTTCTTCATCACTTTGTCTCTCAAGCATCTCAACAAGAAGAACCGATTTGAGCACCGACCTCAGACTTGGCCTTAGTCTCTCTCCTTCTCATTATTCAACACCATCAAGGGAGCAAAGAAGTAGTTTTGATTGGCCACCAGTGAAGTCAACATTGAGGTGCACCCTTGTTGAAAAAAGTCAAATATCTCTGTTTGTTAAAGTATACATGGAAGGCATCCCCATCGGTAGGAAGCTCAATCTGCTGGCACACCATAATTATCATGCTCTTGTTAAGGCTCTTGCCAACATGTTCAGAACTACCATACTCTGCCCTGACTCTCATCAATTACCACTCATCTCTGGGAATAATGTTCATGTTCTTACTTATGAGGATCAAGAAGGGGATTGGATGATGGTTGGAGATGTTCCATGGGAGATGTTCTTGACAAGTGTGAAGAAGTTGAAGATCACAAGAGCTGACAGATGTTAA 591 0.4162 MEEMVMATLDLITASPHSSSSSSSSPTTDNNNNHPSSSSSSSSSLCLSSISTRRTDLSTDLRLGLSLSPSHYSTPSREQRSSFDWPPVKSTLRCTLVEKSQISLFVKVYMEGIPIGRKLNLLAHHNYHALVKALANMFRTTILCPDSHQLPLISGNNVHVLTYEDQEGDWMMVGDVPWEMFLTSVKKLKITRADRC* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2664 196 Gene3D - 98 196 - -
Ahy1g2664 196 ProSiteProfiles PB1 domain profile. 103 195 IPR000270 GO:0005515
Ahy1g2664 196 PANTHER AUXIN-RESPONSIVE PROTEIN IAA31 33 196 - -
Ahy1g2664 196 SUPERFAMILY CAD & PB1 domains 102 190 - -
Ahy1g2664 196 MobiDBLite consensus disorder prediction 12 45 - -
Ahy1g2664 196 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 33 196 IPR003311 GO:0005634|GO:0006355
Ahy1g2664 196 Pfam AUX/IAA family 85 192 IPR033389 -
Ahy1g2664 196 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2664 Ahy-Chr1 105650161 105652205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2664 87 190 B3 DNA Binding Superfamily AT1G59750 35.238 1.92e-10 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX or IAA Ahy1g2664 AUX_IAA 2.40E-31 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2664 K14484 - gmx:100527448 198.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2172 11 134310789 134312717 Ahy1g2664 1 105650161 105652205 hybridization