Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2629 ATGGAAGGGATACCGCACCCACTACCCAGAACTGTTGAGGAGGTTTTCAGCGACTTTAAGGGCAGGCGAGCTGGATTGATCAAAGCCCTAACCACTGATGTTGATAAGTTCTACCAGCAGTGCGATCCTGACAAGGAGAATTTGTGTCTATATGGATTTCCGAATGAAACGTGGGAAGTGAATTTGCCTGTTGAGGAAGTGCCTCCTGAACTTCCTGAGCCAGCATTAGGTATCAACTTTGCCAGAGATGGCATGCAAGAGAAGGATTGGTTATCACTAGTTGCAGTTCACAGTGACTCATGGCTGCTTGCTGTTGCTTTCTATTTTGGTGCTCGCTTTGGATTTGGCAAGAATGAAAGGAAAAGGCTTTTCCAGATGATCAATGATCTGCCAACTATCTTTGAAATTGTTACAGGAAGTGCCAAGCAATCAAAGGATCAACCAGCTGCTCACAACAATGGTAACAAAAGCAAATCAAGTGGAAAGATGTCCCGTCAATCTGAGAATCAGGCCAAAGGAGTGAAGATGTCTGCACCACCGAAAGAAGAGGATGATAGTGGAGAAGAGGAAGAAGATGACGATGAACAAGGTGCGACATGTGGTGCCTGTGGCGATAATTATGGGAATGATGAATTCTGGATTTGTTGTGATATGTGCGAGAGATGGTTCCATGGCAAATGTGTTAAAATTACTCCCGCCAAGGCTGAGCACATCAAGCAATACAAGTGCCCAAGTTGCAGTAACAAGAGGGCTAGAGTTTGA 762 0.4501 MEGIPHPLPRTVEEVFSDFKGRRAGLIKALTTDVDKFYQQCDPDKENLCLYGFPNETWEVNLPVEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDSWLLAVAFYFGARFGFGKNERKRLFQMINDLPTIFEIVTGSAKQSKDQPAAHNNGNKSKSSGKMSRQSENQAKGVKMSAPPKEEDDSGEEEEDDDEQGATCGACGDNYGNDEFWICCDMCERWFHGKCVKITPAKAEHIKQYKCPSCSNKRARV* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2629 253 MobiDBLite consensus disorder prediction 141 197 - -
Ahy1g2629 253 ProSitePatterns Zinc finger PHD-type signature. 200 246 IPR019786 -
Ahy1g2629 253 SMART PHD_3 199 247 IPR001965 -
Ahy1g2629 253 SUPERFAMILY FYVE/PHD zinc finger 188 250 IPR011011 -
Ahy1g2629 253 ProSiteProfiles Zinc finger PHD-type profile. 197 249 IPR019787 -
Ahy1g2629 253 MobiDBLite consensus disorder prediction 141 173 - -
Ahy1g2629 253 MobiDBLite consensus disorder prediction 183 197 - -
Ahy1g2629 253 CDD PHD_AL_plant 200 249 IPR044104 -
Ahy1g2629 253 PANTHER PHD FINGER PROTEIN ALFIN-LIKE 7 1 250 - -
Ahy1g2629 253 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 189 248 IPR013083 -
Ahy1g2629 253 Pfam PHD-finger 200 249 IPR019787 -
Ahy1g2629 253 Pfam Alfin 11 138 IPR021998 GO:0006355|GO:0042393
Ahy1g2629 253 PANTHER CPG BINDING PROTEIN 1 250 IPR045104 GO:0006355|GO:0042393
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2629 Ahy-Chr1 105195781 105199846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2629 1 250 Alfin-like Transcription Factor Family AT1G14510 81.600 1.61e-133 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Alfin-like Ahy1g2629 Alfin 1.10E-69 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2629 - - gmx:100807826 464.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2213 11 135021028 135024916 Ahy1g2629 1 105195781 105199846 hybridization