Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2617 ATGTATCACCCAAACAACTCATTAGTTTGTGATCACCCCATGGATTGTGTTGCCACTGCAATGGATCTTGTCAATGGAGGTAACAGTCTAGCTTCCAAGCAGCGGCTACGCTGGACCAATGATCTCCACGAACGCTTCGTCGACGCGGTTGCTCAACTTGGTGGGCCAGATCGTGCCACACCTAAAGGTGTCCTTAGAGTTATGGGTGTGCAAGGGTTGACAATCTACCATGTCAAAAGTCATTTACAGAAATATCGACTAGCAAAATACCTACCTGACTCCTCAACTGATGGGAAAAACGCTGAGAAGAAAGAAACAGAGGATGTACTTTCTAATCTTGATGGTTCATCTGGGATGCAAATTACTGAAGCACTAAAGCTTCAAATGGAGGTGCAGAAGCGATTGCATGAGCAATTAGAGGTGCAGAGACAACTACAACTAAGGATAGAAGCGCAGGGTAAATACTTGAAGAAGATTATTGAAGAGCAGCAGCGGCTCGGCGGTGTTCTTATAGAAGCACCTGACTGGGGGGCTACAGCTCTGGTCACAGGAGTTACGCGCCAAGAAGATAATAAGACCCACCAAGCAACCCCTGCCACAACCTCTGAGAGCCCCTTTCTGGAGGTAGCTGTGAAAGAACAAGCCCTGGCTAAGAGTCTTTCAATTGATGAATCATTTTCATCTCAGCATGAACCTTTGACACCTGATTCTGGTTGCCATGTTGGCAACCCCACTGGCGGCCCTGAAGAGGAGAGATCAACAAAGAAGCAGCGCTTGAACATTGATGGATCATATTCTAGACCAGAAATGCTGCTTCCGCATCAAATACTGGAGTCAAATGTCTCATCAAATAAGCAACCAAATGTTTTTTCTACTCCCCAGGAGGAATATGATCATTCAATGGGTATAGCTGCCAAAAGTGTGACAAGGAATTCTAGTAGGGTTGTATGA 951 0.4574 MYHPNNSLVCDHPMDCVATAMDLVNGGNSLASKQRLRWTNDLHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSTDGKNAEKKETEDVLSNLDGSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLGGVLIEAPDWGATALVTGVTRQEDNKTHQATPATTSESPFLEVAVKEQALAKSLSIDESFSSQHEPLTPDSGCHVGNPTGGPEEERSTKKQRLNIDGSYSRPEMLLPHQILESNVSSNKQPNVFSTPQEEYDHSMGIAAKSVTRNSSRVV* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2617 316 MobiDBLite consensus disorder prediction 224 258 - -
Ahy1g2617 316 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7 5 309 - -
Ahy1g2617 316 Pfam Myb-like DNA-binding domain 36 86 IPR001005 -
Ahy1g2617 316 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 5 309 IPR044848 GO:0003700
Ahy1g2617 316 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 33 88 IPR006447 GO:0003677
Ahy1g2617 316 Pfam MYB-CC type transfactor, LHEQLE motif 119 165 IPR025756 -
Ahy1g2617 316 SUPERFAMILY Homeodomain-like 32 87 IPR009057 -
Ahy1g2617 316 MobiDBLite consensus disorder prediction 279 316 - -
Ahy1g2617 316 Coils Coil 122 142 - -
Ahy1g2617 316 MobiDBLite consensus disorder prediction 279 295 - -
Ahy1g2617 316 Gene3D - 32 91 - -
Ahy1g2617 316 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 30 90 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2617 Ahy-Chr1 105062165 105065326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2617 68 284 G2-like Transcription Factor Family AT2G01060 64.977 1.33e-86 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Ahy1g2617 Myb_DNA-binding 7.60E-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2617 - - aip:107637104 564.688