Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2609 ATGAAACCCTCAATCGATGACGTTACCTTACCCCCCGCCGCCGCCACCAACTCTGCCGCACCATCCAAGCCTGTCTTCCTTACCAAAGCCCAGCGCGAGCAATTGGCACTCCAGCGCCGTCAGGAGGAAATCGCCAACCAGAAGCGCCGCCAAGAGCAGCTCCTTTCTCGTAATCGACCTTCCTCCGATTCCGCGGCCGATTCCAAACCCTCCGCTGACTCCGATCGGCGCGACCGCGACCGCGACCGCGACAGGGACAGGGATAGGGATAGGGACAGGGACAGAGACCGCGAACGAGAACGGGAACGGGAACGGGAGCGCGATAGGGCACGCGATCGGGACCGCGAGGCGGAGCGACGGAACCGAGAGAGGGAGCGCGAAGAGGAAAGTAGGGCTCGGGAACGAGCACGGTTGGAGAAATTGGCGGAGCGGGAGCGCGAGAAGGAGCTCGAATCCATCAAAGAACAGTACCTTGGTTCGAAGAAGCCGAAGAAGCGCGTGATCAAGCCCAGCGAGAAGTTTCGTTTCTCCTTCGACTGGGAGAACACCGAGGACACATCTCGCGACATGAACTCCCTCTACCAGAACCCTCACGAGGCTCAGCTCCTCTTCGGCCGCGGCTTCCGCGCCGGCATGGACCGCCGCGAGCAGAAGAAGCTCGCCGCCAAGAACGAGAAGGAGATGCGCGAGCAGATCCGTCGCAAGGACGGCGTGGAGGAGAAGCCCGAGGAGGCCGATGCCCAGCGCCGCAAGGAGGCTGCTGCCGACCTCTACGACACCTTCGACATGAGGGTTGACCGCCATTGGAGCGAGAAGAAGCTTGAGGAAATGACGGAGAGGGATTGGCGTATCTTCAGGGAGGACTACAACATCTCCTACAAGGGTTCCAAAATACCTCGCCCCATGCGGAGCTGGGTAGAGAGCAAGCTCAGCAATGAGCTTCTGAAGGCGGTGGAGAAGGCTGGGTACAAGACCCCTTCCCCCATTCAGATGGCTGCAATTCCCCTTGGCTTGCAGCAGCGTGATGTCATTGGCATTGCCGAGACCGGTTCCGGTAAGACTGCTGCTTTTGTTCTTCCCATGTTGAGTTACATTACTAGGCTTCCCCCCATGAGTGAGGAGAATGAGGCTGAGGGTCCCTATGCTGTTGTTATGGCTCCGACTCGCGAGCTTGCCCAGCAGATTGAGGATGAGACTGTTAAGTTTGCTCAGTATTTGGGTATTAAGGTTGTCTCCATTGTTGGTGGTCAGTCCATTGAGGAACAAGGGTTTAAGATTAGGCAAGGCTGTGAGATTGTCATTGCTACTCCAGGTCGTTTGATAGATTGTTTAGAGCGGCGATATGCTGTGCTGAACCAATGCAATTATGTTGTTCTCGATGAGGCGGATCGCATGATTGATATGGGTTTTGAGCCACAGGTGATGGGTGTCTTGGATGCCATGCCTTCCAGCAACTTGAAACCTGAGAATGAAGATGAGGAGCTTGATGAGAAGAAGATTTATAGGACCACTTATATGTTCAGTGCCACCATGCCTCCAGCAGTGGAGAGGCTTGCTAGGAAGTATCTGAGGAATCCTGTTGTGGTGACCATTGGCACTGCCGGAAAGGCAACTGACTTGATCAGCCAACATGTGATAATGATGAAGGAATCTGAGAAATTCCATAAGCTTCAAAGGTTGCTTGATGAGCTTAATGACAAGACGGCAATTGTGTTTGTTAACACCAAGAAGAATGCGGATATGGTTGCCAAGAATTTGGACAAGGAAGGGTATCGTGTGACTACATTGCATGGAGGGAAGTCGCAGGAGCAGAGAGAGATTAGTCTGGAAGGGTTTAGGACCAAGAGATACAATGTTCTTGTTGCCACAGATGTTGCCGGACGTGGTATTGACATACCCGATGTGGCTCATGTGATAAACTATGATATGCCTGGGAACATTGAAATGTACACGCATCGCATTGGGCGTACTGGTCGTGCTGGAAAGACTGGTGTGGCAACAACATTCCTCACTCTTCAGGACACTGATGTCTTCTATGACCTCAAACAGATGCTTATTCAAAGCAACAGCCCTGTTCCACCTGAATTGGCAAGGCACGAAGCCTCCAAGTTCAAGCCAGGGACTATTCCCGACAGACCACCTAGACGAAATGACACTGTGTTTGCACATTAG 2172 0.5341 MKPSIDDVTLPPAAATNSAAPSKPVFLTKAQREQLALQRRQEEIANQKRRQEQLLSRNRPSSDSAADSKPSADSDRRDRDRDRDRDRDRDRDRDRDRERERERERERDRARDRDREAERRNREREREEESRARERARLEKLAEREREKELESIKEQYLGSKKPKKRVIKPSEKFRFSFDWENTEDTSRDMNSLYQNPHEAQLLFGRGFRAGMDRREQKKLAAKNEKEMREQIRRKDGVEEKPEEADAQRRKEAAADLYDTFDMRVDRHWSEKKLEEMTERDWRIFREDYNISYKGSKIPRPMRSWVESKLSNELLKAVEKAGYKTPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPMLSYITRLPPMSEENEAEGPYAVVMAPTRELAQQIEDETVKFAQYLGIKVVSIVGGQSIEEQGFKIRQGCEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVMGVLDAMPSSNLKPENEDEELDEKKIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLISQHVIMMKESEKFHKLQRLLDELNDKTAIVFVNTKKNADMVAKNLDKEGYRVTTLHGGKSQEQREISLEGFRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLTLQDTDVFYDLKQMLIQSNSPVPPELARHEASKFKPGTIPDRPPRRNDTVFAH* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2609 723 MobiDBLite consensus disorder prediction 69 162 - -
Ahy1g2609 723 SMART ultradead3 322 544 IPR014001 -
Ahy1g2609 723 Coils Coil 215 241 - -
Ahy1g2609 723 Pfam Helicase conserved C-terminal domain 553 661 IPR001650 -
Ahy1g2609 723 MobiDBLite consensus disorder prediction 38 56 - -
Ahy1g2609 723 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 458 466 IPR000629 -
Ahy1g2609 723 Coils Coil 27 57 - -
Ahy1g2609 723 Pfam DEAD/DEAH box helicase 328 518 IPR011545 GO:0003676|GO:0005524
Ahy1g2609 723 Gene3D - 264 533 IPR027417 -
Ahy1g2609 723 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 83 716 - -
Ahy1g2609 723 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 379 682 IPR027417 -
Ahy1g2609 723 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 334 529 IPR014001 -
Ahy1g2609 723 SMART helicmild6 580 661 IPR001650 -
Ahy1g2609 723 MobiDBLite consensus disorder prediction 698 723 - -
Ahy1g2609 723 MobiDBLite consensus disorder prediction 38 166 - -
Ahy1g2609 723 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 303 331 IPR014014 GO:0003724
Ahy1g2609 723 MobiDBLite consensus disorder prediction 1 25 - -
Ahy1g2609 723 Gene3D - 534 721 IPR027417 -
Ahy1g2609 723 MobiDBLite consensus disorder prediction 216 251 - -
Ahy1g2609 723 CDD DEADc_DDX23 314 530 - -
Ahy1g2609 723 CDD SF2_C_DEAD 541 670 - -
Ahy1g2609 723 PANTHER - 83 716 - -
Ahy1g2609 723 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 556 700 IPR001650 -
Ahy1g2609 723 MobiDBLite consensus disorder prediction 691 723 - -
Ahy1g2609 723 Coils Coil 107 151 - -
Ahy1g2609 723 Coils Coil 547 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2609 Ahy-Chr1 104989629 104992339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2609 301 683 Eukaryotic Initiation Factors Gene Family AT3G19760 31.510 9.75e-61 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2609 K12858 - gmx:100799264 1129.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2238 11 135438560 135442079 Ahy1g2609 1 104989629 104992339 hybridization