Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2602 ATGGGTGAAGGGTTGAGGCTACTGAAAATCACAGTTGTGCGAGGGAAAACATTAGTGATCCGGGATTTCAAGAGCAGTGATCCTTATGTTGTGGTCAAGCTTGGCAATCAGAATGTTAGTATGATTCATCTAACTGTGTATCAGACAGCAAAGACCAGGGTCATCAATAGCTGCTTGAATCCTGTTTGGAATGAAGAGCTAAATTTCACTCTCACTGAACCATTGGGATTGCTCAATTTGGAGGTATTTGATAAAGATGTTTGGAAGGCTGATGACAAGATGGGAAAATCATACCTGAACCTTCAGCCATTGGTGTCTGCAGCTAGATTGAGGGACATTTTGGGGAGTTCATGTGGTGAAACAGCACTGAGGAAGGTGATGCCAGAGAGAGATAACTGTCTTGTCCGTGAAAGCATCATCAACAATAATGTGAATGGAGAGGTGGTGCAGAATGTTTGGTTAAGGCTTGATGGAGTTGAGTCTGGGGAGCTTGAATTGACCATCAAGTTGATCACTCGTGTTGCCTCTTAG 531 0.435 MGEGLRLLKITVVRGKTLVIRDFKSSDPYVVVKLGNQNVSMIHLTVYQTAKTRVINSCLNPVWNEELNFTLTEPLGLLNLEVFDKDVWKADDKMGKSYLNLQPLVSAARLRDILGSSCGETALRKVMPERDNCLVRESIINNNVNGEVVQNVWLRLDGVESGELELTIKLITRVAS* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2602 176 Pfam C2 domain 8 109 IPR000008 -
Ahy1g2602 176 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 11 1 173 - -
Ahy1g2602 176 SMART C2_3c 7 113 IPR000008 -
Ahy1g2602 176 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 173 IPR044562 -
Ahy1g2602 176 Gene3D C2 domain 5 175 IPR035892 -
Ahy1g2602 176 ProSiteProfiles C2 domain profile. 1 114 IPR000008 -
Ahy1g2602 176 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 170 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2602 Ahy-Chr1 104817562 104818564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2602 1 169 C2H2 Transcription Factor Family AT4G05330 42.105 4.22e-34 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2602 - - aip:107636908 335.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2249 11 135726928 135728010 Ahy1g2602 1 104817562 104818564 hybridization