Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2585 ATGCCATTGGTGTCTGCCTTTGAAAATTCGTTGTATTTCATCAGGAATAATGAGGTAACATTAATATTGCATGAAAAATTAAAAATAATAAGTGTATATATTATATTATTATTGATGGGGATTGATGAGGCACAAGAGTCATTGCTTGCAAGAGATCATTATCATGAGAAAAGTGACCTCCAGAGAAGAAGGTCCACCAGGAATTATGGCACAGCTTCATCAGATTCATCGTCACAGACATTCAACAATCTCCAACAAAATAACAGTAATCATGTAGTTATAGTCCAAAATAATAATAATAATAATAATAATAACCCTTCAACAGAACAAGCAGAATTTCAATTGAAACCAGTGTTGTTGTGGCTAACAATGTACCTAGGTGGAGGTACCCTATGCTTCTATATGACAAGTAACCAAATTGAAGGTACAAAAACCAATCCCTTTCTTGATGCACTTTACTTGTGTGTTGTGACAATGACCACTGTGGGTTATGGAGATCTTGTCCCTAAAAGCACAGTGGCAAAACTACTTGCATGCTTCTACGTCTTCACCGGAATGGCCCTCGTTGGTTTGATTCTTAACAAAGCAGCAGATTACATTGTTGAGAAGCAAGAAATGTTGGTTGTTAAGGCCATGCACAAAGAGCTTGACAAAGAGTTTCAATCTAACAACAATAGCAACAAGGCCAAACACAAGTTCTTGGTTGCAATTTGCACCTTCTTGGTGCTTATTACAGTGGGAATGATTTTCCTATCTTGGGTTGAGGATCTTGATTTTGTGGATGCATTGTATTGTGTTTGTTCCACAGTGACAACTTTGGGTTATGGGGATAAGAGTTTTTCAACTGGAATTGGTCGTGCTTTTGCAGTGTTTTGGATATTGAGTAGCACCATTTGCTTAGCTCAATGTTTTGCATATCTTGCTGAAATGCACACTGATGAAAGACAAAGATCACTTGCCAAAATGATTCTTTCTAGGAAAATCTCACGTCCTGATCTTGAAGCTGCTGATCTTGATGGAGACAAATCTGTTAGTGCTGCAGAGTTTGTTGTATACAAGTTGAAGGAAATGGGAAAGATCAACGATGAAGATGTTTCCGATGTATTGGAATGGTTTAGAAAACTAGATGTAGATAAATCAGGAACTCTGACAGAAGCTGATATCATTTGA 1170 0.3726 MPLVSAFENSLYFIRNNEVTLILHEKLKIISVYIILLLMGIDEAQESLLARDHYHEKSDLQRRRSTRNYGTASSDSSSQTFNNLQQNNSNHVVIVQNNNNNNNNNPSTEQAEFQLKPVLLWLTMYLGGGTLCFYMTSNQIEGTKTNPFLDALYLCVVTMTTVGYGDLVPKSTVAKLLACFYVFTGMALVGLILNKAADYIVEKQEMLVVKAMHKELDKEFQSNNNSNKAKHKFLVAICTFLVLITVGMIFLSWVEDLDFVDALYCVCSTVTTLGYGDKSFSTGIGRAFAVFWILSSTICLAQCFAYLAEMHTDERQRSLAKMILSRKISRPDLEAADLDGDKSVSAAEFVVYKLKEMGKINDEDVSDVLEWFRKLDVDKSGTLTEADII* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2585 389 PRINTS Two pore domain K+ channel signature 157 185 IPR003280 GO:0005267|GO:0016020|GO:0071805
Ahy1g2585 389 PRINTS Two pore domain K+ channel signature 271 280 IPR003280 GO:0005267|GO:0016020|GO:0071805
Ahy1g2585 389 SUPERFAMILY Voltage-gated potassium channels 117 207 - -
Ahy1g2585 389 SUPERFAMILY EF-hand 334 388 IPR011992 -
Ahy1g2585 389 ProSitePatterns EF-hand calcium-binding domain. 376 388 IPR018247 -
Ahy1g2585 389 ProSiteProfiles EF-hand calcium-binding domain profile. 363 389 IPR002048 GO:0005509
Ahy1g2585 389 Gene3D - 113 211 - -
Ahy1g2585 389 MobiDBLite consensus disorder prediction 55 81 - -
Ahy1g2585 389 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 76 387 IPR003280 GO:0005267|GO:0016020|GO:0071805
Ahy1g2585 389 SUPERFAMILY Voltage-gated potassium channels 226 326 - -
Ahy1g2585 389 PANTHER OUTWARD RECTIFYING POTASSIUM CHANNEL PROTEIN 76 387 - -
Ahy1g2585 389 Gene3D - 212 331 - -
Ahy1g2585 389 Gene3D - 333 389 - -
Ahy1g2585 389 MobiDBLite consensus disorder prediction 65 81 - -
Ahy1g2585 389 Pfam Ion channel 121 201 IPR013099 -
Ahy1g2585 389 Pfam Ion channel 240 310 IPR013099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2585 Ahy-Chr1 104486508 104488106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2585 115 389 Ion Channels AT5G55630 55.714 3.93e-109 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2585 K05389 - gmx:100799492 420.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2271 11 136289223 136290823 Ahy1g2585 1 104486508 104488106 hybridization