LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy1g2579	ATGGAAGTTAGTTCATCCATGGTGTTTATCATAATAAGCTTCATCATCTCTTTGCTATTGCTATGGCATGCAAAGAAGGGTAAAAGTGTCCATAAAGTGCCACCTGGGCCATGGAAACTACCTCTCATAGGGAACCTGCATCAACTTGCAGGCTCATCACTTCCACACCATGCTCTCAGAAAACTAGCAAACAAACACGGTCCACTCATGCACCTTCAACTGGGTCAGATTTCTGCAGTGATTGTCTCATCCCCCAACATGGCCAGAGAAATCATGAAAGCTCATGATCTTGCTTTTGCAGACAGGCCTGAGTTCCTTCCTTCCAAGATCATAACCTATGGATCAACAGACATTGCATTCTCTCCCTATGGTGAATACTGGAGACAGATGAGGAAGATATGCACACTTGAGCTTCTAAGTTCTAAGAAGGTTCACTCTTTCTCCTTTATCCGAGAAGAGGAGGTAGCTAACATGGTAGAAACAATTCGCAAATCCCCAGGTGCAACCATCAATCTCAGTAAAATGATTAACAATCTCATAAGCACTGTGATTTCTAGAGCTGTTTTTGGCAACCTATCCGAAGACCATGAACAGTTTGTGTCCTTTGTGAAGAAGACAATAGCGTTATCCGATGGATTTGACCTTGCGGATTTGTTTCCTTCCTTGAAACCTCTGCATTTCATCACTGGTTTTGAAGCCAAACTGAAGGAGATGCATGTCAAGATCGACAAGACCTTAGACAAGATCATAAAGGAGAATGAAGCAAGGAAATTGGAAGGTATACACCGGCAAGAGCAAGAACAAGAAGTAAAGACTGAGAATCTTGTTGAGGTTCTTCTAAGAGTCCAACATAGTGGCACCCTTGACACCCAAATTACAATGAACAATGTCAAAGCAGTCATTTGGGACATATTTGCTGCTGGAACAGACACTTCAGGAGTAGTCATAGAGTGGGTTATGTCGGAATTGATGAGAAGCCCCAGAGCTATGAAGAAGGCACAGACTGAGATTCGAAAAGCCTTGATAGAGAAGCAAACAATCCAGGAGGCAGATGTTGCAGAGCTTCCCTACTTGAAGGCTGTGATAAGCAAAACAATGAGGTTACACCCTCCTCTTCCTCTGTTGCTTCCAAGACAATCCAGAGAAGAGTGCACCATCCATGGATACCATATACCGATCAAGACTAAAGTCATGGTAAATGCATATGCGCTCGGAAGAGATCCCGATTACTGGTATGATTCGGAAACCTTCCTACCAGAAAGGTTCCAGGACACTCCTATGGATTTCAAAGGATCAAACTTCGAGTACATCCCCTTTGGAGCAGGAAGGAGAGCTTGTCCGGGACTTACTTTCGGTTTAGCCAACGTTGAGTTTGCTCTAGCTATGCTACTCTACCACTTCAACTGGGAACTCCCTAAAGGAATTAGGCCAGAGGATCTGGATATGAATGAAGCGCAAGGAGCTGTGGTTGGAAGGAAAAACCACCTCTACTTGATTCCCACACCTTACCATTTTTAG	1518	0.4387	MEVSSSMVFIIISFIISLLLLWHAKKGKSVHKVPPGPWKLPLIGNLHQLAGSSLPHHALRKLANKHGPLMHLQLGQISAVIVSSPNMAREIMKAHDLAFADRPEFLPSKIITYGSTDIAFSPYGEYWRQMRKICTLELLSSKKVHSFSFIREEEVANMVETIRKSPGATINLSKMINNLISTVISRAVFGNLSEDHEQFVSFVKKTIALSDGFDLADLFPSLKPLHFITGFEAKLKEMHVKIDKTLDKIIKENEARKLEGIHRQEQEQEVKTENLVEVLLRVQHSGTLDTQITMNNVKAVIWDIFAAGTDTSGVVIEWVMSELMRSPRAMKKAQTEIRKALIEKQTIQEADVAELPYLKAVISKTMRLHPPLPLLLPRQSREECTIHGYHIPIKTKVMVNAYALGRDPDYWYDSETFLPERFQDTPMDFKGSNFEYIPFGAGRRACPGLTFGLANVEFALAMLLYHFNWELPKGIRPEDLDMNEAQGAVVGRKNHLYLIPTPYHF*	506

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy1g2579	505	Pfam	Cytochrome P450	34	494	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Ahy1g2579	505	PANTHER	CYTOCHROME P450 71D8	9	504	-	-
	Ahy1g2579	505	PANTHER	OS08G0105600 PROTEIN	9	504	-	-
	Ahy1g2579	505	SUPERFAMILY	Cytochrome P450	34	502	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Ahy1g2579	505	PRINTS	P450 superfamily signature	437	446	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Ahy1g2579	505	PRINTS	P450 superfamily signature	307	324	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Ahy1g2579	505	PRINTS	P450 superfamily signature	360	371	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Ahy1g2579	505	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	439	448	IPR017972	GO:0005506\|GO:0016705
	Ahy1g2579	505	Coils	Coil	330	350	-	-
	Ahy1g2579	505	Gene3D	Cytochrome P450	26	498	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy1g2579	Ahy-Chr1	104460358	104462224	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy1g2579	14	503	Cytochrome P450	AT3G26300	40.396	1.08e-136	402

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy1g2579	-		-	gmx:100800554	659.833

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