Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2575 ATGCAAATATCTAAGAGACATCCAAGCCAAGCTGGTATCCGATTCTACCACCAACCTGTGCAAAGCATGTATCAAATGCTACAAAGCAATCTATGCCACAGTATCCACCATGATAATATGATGAAGGGAGCCACTGTTTCTTTTGAATCCTGCAAGGATCAATACTTTACCCTGGAATCATCCCCAGCAACCACTGAGCTCATAGGTTGTGAAACTGATTCCCCTTCCTATGCCAGTGGATTATCTTCAAATAGGAGTCCATTTTCCCCACAAGTCTCTCAGTCATGCTATTCAGATAACCACCACTCATCCGACAACACCTATGGCTCGCCTTACTCTAGCGTTGATGATGGGAATGAATGGAAGCACAAGCTCAGAGAACTCGAGATTTCGTTGTTGGAGCCTAATGAATCAGATGCTGCTGACAGTTATGACAACAACTGTGTCCAAGGTGGCCTCACCACAGCCTCTCCAACAATTGAATATGATTGGGATCAGATTGTGCAGATGATTCCAAAGTTAGAGCTGAGAGATGTGCTGGTTCGATGCGCGCAGGCCGTGTCTGATGATGATATAGCCACAGCAATTGGTTGGATGGATAATGTGTTGGGGAAGATGGTATCAGTTTATGGGGAACCATTGCAGAGGCTAGGTGCTTACTTGTTGGAGGGGCTAAGAGCAAGATTGGAGTCATCTGGGAGTATGATATACAAATCCTTAAAGTGTGAACAACCAACAAGCAAAGAACTTATGAGTTACATGCACATATTGTATCAGATTTGCCCATTTTGGAAGTTTGCTTATGTAGCTGCAAACGCAGTCATCTTAGAAGCAATGGCAACTGAGTCCATGATTCATATACTCGATTTCCAAATCACACAGGGCACACAGTGGCTTTTACTTATTCAAGCTCTTGCACATAGGCCAGGTGGACCGCCGTCCATTCGCATAACCGCCGTCGATGATTCCCAATCCATTCATGCTCGCGGCGGAGGACTTGAGATTGTTGGACAACGGCTCTCGGATTTCGCCAGGTCTTGCGGAGTGCCATTGGAGTTTCACATTGCTGCAATGTGTGGCAGCCAAGTTGAAAGAACAAATATAGTTATTCGAGCCGGGGAAGCTCTGGCTGTAAATTTTCCTTATGTTCTGCATCACATGCAGGATGAGAGTGTAAGCACGGAGAATCACAGGGACAGATTGTTGAGATTGGTTAAGAGCTTGTCTCCCAAGGTTGTGACACTTGTTGAGCAAGAATCCAATACCAACACTTCGTCTTTCTTCAACAGGTTTGTTGAGATAATGGATTACTACACTGCCATGTTTGAATCAATAGATGCCGGGTGCCCGAGAGATGACAGGAAAAGGCTGAATGCGGAGCAGCACTGTGTGGCGCGGGACATAGTAAACATGGTCGCTTGCGAGGGGGTGGAGAGGGTTGAGAGGCATGAACTTCTAGGAAAGTGGAGAATGAGATTCTCCATGGCTGGTTTCAGACAATGGCCGTTGAGTCCTTCTGTGGTGGCTGCTGTCCGGAACATGTTGAAAGAATTCAATGGAAATTATAGGGTTGAGCAGAGAGATGATGCTCTCTATCTAGGATGGATGAGGAGAGCTATGGTTACTTCTTCAGCTTGGTGCTGA 1644 0.4592 MQISKRHPSQAGIRFYHQPVQSMYQMLQSNLCHSIHHDNMMKGATVSFESCKDQYFTLESSPATTELIGCETDSPSYASGLSSNRSPFSPQVSQSCYSDNHHSSDNTYGSPYSSVDDGNEWKHKLRELEISLLEPNESDAADSYDNNCVQGGLTTASPTIEYDWDQIVQMIPKLELRDVLVRCAQAVSDDDIATAIGWMDNVLGKMVSVYGEPLQRLGAYLLEGLRARLESSGSMIYKSLKCEQPTSKELMSYMHILYQICPFWKFAYVAANAVILEAMATESMIHILDFQITQGTQWLLLIQALAHRPGGPPSIRITAVDDSQSIHARGGGLEIVGQRLSDFARSCGVPLEFHIAAMCGSQVERTNIVIRAGEALAVNFPYVLHHMQDESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTSSFFNRFVEIMDYYTAMFESIDAGCPRDDRKRLNAEQHCVARDIVNMVACEGVERVERHELLGKWRMRFSMAGFRQWPLSPSVVAAVRNMLKEFNGNYRVEQRDDALYLGWMRRAMVTSSAWC* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2575 547 ProSiteProfiles GRAS family profile. 167 547 IPR005202 -
Ahy1g2575 547 Pfam GRAS domain family 176 546 IPR005202 -
Ahy1g2575 547 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 15 546 IPR005202 -
Ahy1g2575 547 MobiDBLite consensus disorder prediction 78 113 - -
Ahy1g2575 547 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 15 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2575 Ahy-Chr1 104435471 104438533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2575 1 546 GRAS Transcription Factor Family AT4G17230 56.545 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy1g2575 GRAS 2.30E-125 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2575 - - aip:107636708 1063.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2281 11 136363721 136366758 Ahy1g2575 1 104435471 104438533 hybridization
Ahy1g2575 1 104435471 104438533 Ahy14g0565 14 7761184 7764915 PCT
Ahy1g2575 1 104435471 104438533 Ahy4g0488 4 6359725 6363459 PCT