Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2568 ATGGATGTTGATTCGGAGCCACTCAATTCACAAGAGAACGTTGAAGATTGCTTGATGACCGGTGTGGAAGAGAATGTAAATTGCACCTGTGATTGCGGTGGCAGCAGTAGCAAGTGTGTTGTTGTGACGGCCGATGATATTATAAACCAGACATTTGAAACATCAGATGCAGCTTATAACTTGTATGTGCGTTATGCAAGGTGTGTCGGGTTCGGAGTTCGCAAGGGTGATATAGCACGTGGAAAAGATGGAACACAACGCAGAAGGCGATTTTTTTGCAACAAGGAAGGAAAGAGAGCCGATAAATACATCTCTAATTTGAACAGGAAAAGGGAGCATAAAGCACTGACTCGTACGGGTTGTGAAGCCATGCTTGCGGTGTACTTTGACGCCAAAACTTCAGCTTGGAGAGTTAAAAAATTAGTTGAAAAGCACAACCACGATCTTGTCCCCCAATGCTTGGTACACTTAATTCCAAACCACCGTGGGATGAATGAGGCTCAAAAAGCTCAGGCAAACACCATGCACTATAATGGTCTTCCAAGCTCTAAGATAATGGGACTAATGGTAGGCCAAGCTGGGGGTTATGCTAATGTCGGGTTCACAAAGAAGGATCTGAATAACCACATTGAAAGAACTCGTCGTGCAAAGCTCATTGGTGGGGATTCTAATGCAACAATTAGCTATCTACTTGGAAAAGCCGATGTTGACCCCATGGCCATTGCAAGGTACAGTGCTACTGATGAAAGTCGGCTGGCGAATCTATTTTGGGCAGATGGCATTTGTAGGGCAGATTATCAGTGCTTTGGAGATGTGCTTGCATTTGATACAACCTATCGGAAAAATAAGTACAGAAGACCGTTGGTTATCTTCTCGGGTTGTAACCATCACCGTCAAACATGCATATTTGGCTTTGCCTTGATAGAGAACGAACAAACAGCAACATATACGTGGTTGTTGCAAAACTTCTTAGATGTCATGCTGAACAAGTCTCCTAGTGTTGTGGTCACAGATGGTGATGAGGCAATGAAGGCAGCAATTCAAGAAATCTTTCCAAATGCAACTCACCGATTATGTGGTTGGCACATTCAGAGAAATGTAACAGCAAACATAAAAAGCAAAGGTTTTTCCGACGACTTCAGAAGATGTTTGTATGCTCCATGGCATCCGAATGAATTTGAAGGATATTGGGAGAATATGATAAAAAAATATGGGTTGGAGGAAAATGAATGGGTACTAGATGAGTATCAAAAGAGGAAAAGCTGGGCAAGCGCCTACTTGCGAGATAAATTCTGTGCTGGATTTAGAACAACATCAAGGTGTGAAGGGATAAACAACTTCATCAAGAGGTTTATTGGCATTCGTCAAAGTCTTTTAGAGCTAGTCCAGAATCTTGAACATGCTCTCAGGGATTATAGACATAACGAATTAGTTTCTCAATTTAAGACGGTGTACGGAGAGCCTGTGTTAACAACTCGCTTAGCTGCATTGGAGCTTTGTGCTGCAAATTTTTACACACGGGAGATGTTTGGCAAAGTAAAAACAGAAATTGAAGGAGTGGCTGCATTAGATGTTATAAATGAGGAAAATATATCAACTACTGTTGTTTTAAAAGTTAAGGAGTATGACAGAGGGCAACATATATACACCGTACTTTATGAGCGCAACACCGAGAATATGGAGTGTGAATGTAGTAGGTGGAGTAGTGAAGGCATTCCCTGTAGCCACATGTTTTGTGCCATGAAAAGGCTAGGTTTACAGAAGTTGCCAGAAAGTCTTCTTTTGAGAAGATGGTCCAAGGATGCCAAAAAGTATCCGGATGAAAGTTCAGCTGGAAGCACTGTGCAAGATGGAGAAAGAGATTTTTTAATGCGCTATGGCGCATTGTCAGTGGCAGCTACGTGGATGGTATTCTTAGGAGCTCAAGATGGTCCTTCTTTCCATGACACTATGAATGAAGTTTCTCGTTTGACCAAAATACTAGAGCAAAAGTCGTGCTTGAAAAGAGGAACAAGAGATTCTCCCATGCCGAACTTTGTTGGTGACCCTTCAGTTGTCAAGACAAAAGGTGCACCAAAGGGAAAAAAAGAGAGTAGAAAACGGAGGTGCACTAAATGCAACAATGCTGGTCATGTAAAGAAGAATTGTCCTGTGAAGAATGAGGGTGACAATTTGGGTGATAAGATTAGTGGTGGCACACAGGCTAGCTTTGGTGTAGAAGAGGAGCTTCCCAAAGACCCTATGGCTTCTCAAGGGACGCAAGCTAACAATGATGATTTTCAGCAAAAATAA 2292 0.4219 MDVDSEPLNSQENVEDCLMTGVEENVNCTCDCGGSSSKCVVVTADDIINQTFETSDAAYNLYVRYARCVGFGVRKGDIARGKDGTQRRRRFFCNKEGKRADKYISNLNRKREHKALTRTGCEAMLAVYFDAKTSAWRVKKLVEKHNHDLVPQCLVHLIPNHRGMNEAQKAQANTMHYNGLPSSKIMGLMVGQAGGYANVGFTKKDLNNHIERTRRAKLIGGDSNATISYLLGKADVDPMAIARYSATDESRLANLFWADGICRADYQCFGDVLAFDTTYRKNKYRRPLVIFSGCNHHRQTCIFGFALIENEQTATYTWLLQNFLDVMLNKSPSVVVTDGDEAMKAAIQEIFPNATHRLCGWHIQRNVTANIKSKGFSDDFRRCLYAPWHPNEFEGYWENMIKKYGLEENEWVLDEYQKRKSWASAYLRDKFCAGFRTTSRCEGINNFIKRFIGIRQSLLELVQNLEHALRDYRHNELVSQFKTVYGEPVLTTRLAALELCAANFYTREMFGKVKTEIEGVAALDVINEENISTTVVLKVKEYDRGQHIYTVLYERNTENMECECSRWSSEGIPCSHMFCAMKRLGLQKLPESLLLRRWSKDAKKYPDESSAGSTVQDGERDFLMRYGALSVAATWMVFLGAQDGPSFHDTMNEVSRLTKILEQKSCLKRGTRDSPMPNFVGDPSVVKTKGAPKGKKESRKRRCTKCNNAGHVKKNCPVKNEGDNLGDKISGGTQASFGVEEELPKDPMASQGTQANNDDFQQK* 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2568 763 Pfam MULE transposase domain 272 366 IPR018289 -
Ahy1g2568 763 PANTHER OS02G0262500 PROTEIN 46 638 - -
Ahy1g2568 763 Coils Coil 455 475 - -
Ahy1g2568 763 ProSiteProfiles Zinc finger SWIM-type profile. 549 585 IPR007527 GO:0008270
Ahy1g2568 763 MobiDBLite consensus disorder prediction 671 763 - -
Ahy1g2568 763 MobiDBLite consensus disorder prediction 749 763 - -
Ahy1g2568 763 MobiDBLite consensus disorder prediction 693 708 - -
Ahy1g2568 763 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 46 638 IPR031052 GO:0006355
Ahy1g2568 763 ProSiteProfiles Zinc finger CCHC-type profile. 701 717 IPR001878 GO:0003676|GO:0008270
Ahy1g2568 763 Pfam FAR1 DNA-binding domain 61 151 IPR004330 -
Ahy1g2568 763 SMART 26again6 560 587 IPR006564 GO:0008270
Ahy1g2568 763 SUPERFAMILY Retrovirus zinc finger-like domains 693 721 IPR036875 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2568 Ahy-Chr1 104338296 104344128 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy1g2568 MULE 4.10E-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2568 - - ahf:112717474 1355.5