Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2548 ATGGAAAAAAGGAAGAAGGAGCCTAGATTGGAAACAAAAACTGGGTGTGAAGCCCGAATGGATGTTAAATTTGTACCAGAAACTGGAAGGTGGCATATTTTTTGTTTCTCTGACGAACACAACCATGATCTATTGGATACACAATTCAGTGCTATGTTGCATGCCCACAGAAAAATGTCAGAGGCAGATATTATGCAAATGATGAACATGCTAAAGTTCGGGATTAGCACTTCACAGATATTTGGTCTTCTAGCTAGTCAAGCAGGCGGGTATGAATTTGTTGGCTATGGTTCCAGAGATATGTACAATGAGATTGCTCGGCAAAGGCGTCAAATTCATGGTGATGCAGCACGAGTGTTGAAGAAGTTGGAGGATATGCGGTTGAAGGATCCACAATTATATTTCAAGGCATGTCATGATTCAAGAGGCTTGTTACGTAACTTGTTCTGGTCTGATGGGATTAGCCAACTAGACTACCGACTCTTCAGGGATGTTATTGCTTTTGATACTATGTACAAGAAGAACAAGTATAGTTGTCCATTAGTCATATTCAGCGGGGTTAACCACCACAACCAAACAATTGTTTTTGCTACTGCGTTTATTGTGGACGAAACTACTAATACATATATTTGGCTCCTGCGTCAGCTCATGTTTGCAATGAAGGATTATGCGCTTGGCCACCTTATTCGAAATGCAACTAGCAATGTTGGAAATCCATCATTTACATCTAAATTTAGAAAAATCATGTTGGAAGACTACGAGATTCCCGTGTTTAAGCGTAAGTGGGTTCAGCTTATTGAAGAATTTGGCCTTGAAGATAAGCCGTGGGTGAACAACATGTATGAAGAGAAGCATATGTGGGCTACTGCATATATAAGAGGAAAATTTTTACTGGCTTTAGAACTACCTCAAGATGTGAAGGTACCCGTCATGCAAACTTGTATAGAGCTGCTAGAGAGATTTGCTGCTGAGTTGTACACTCATGAGATATTTCTTTTATTTCGGCCATTTCTCTCTAGAGCTGGATCAATGCGGGTGCTAAACAAAATAGAGAATAACGAAGATTGCATAAAGTACATTGTGTGTAAGCATGGGAGGCCCGATTTTCTGTGGATCGTTGAATTTCATCAAGAAGAAATGATCTTCATGTGTACCTGTTTAAGAATGGAGTCATTTGGAATTCCATGCGAACATATTGTGAAAGTTCTCGTTGACAAAGACATTTGTGAGATTCTCCGGTCATTGGTATTGGATAGATGGAACAAAAATGTGAAATCAGCACTCAATGATCCAAGTGGGTTCACTAGGAATGCTGTTGTTATTAGTCGTCAAAGTACCTTGATGGAATTTTCTAAACAATTGGCTGCTGTTGCTGCTAAAGTACCAGAGAGATATGAAGAGACACGTGACAAAATTATGGGATTGTACTCATATTACAAGGCTGCAGACGAAGGCACTAATCAACCTTAG 1470 0.3973 MEKRKKEPRLETKTGCEARMDVKFVPETGRWHIFCFSDEHNHDLLDTQFSAMLHAHRKMSEADIMQMMNMLKFGISTSQIFGLLASQAGGYEFVGYGSRDMYNEIARQRRQIHGDAARVLKKLEDMRLKDPQLYFKACHDSRGLLRNLFWSDGISQLDYRLFRDVIAFDTMYKKNKYSCPLVIFSGVNHHNQTIVFATAFIVDETTNTYIWLLRQLMFAMKDYALGHLIRNATSNVGNPSFTSKFRKIMLEDYEIPVFKRKWVQLIEEFGLEDKPWVNNMYEEKHMWATAYIRGKFLLALELPQDVKVPVMQTCIELLERFAAELYTHEIFLLFRPFLSRAGSMRVLNKIENNEDCIKYIVCKHGRPDFLWIVEFHQEEMIFMCTCLRMESFGIPCEHIVKVLVDKDICEILRSLVLDRWNKNVKSALNDPSGFTRNAVVISRQSTLMEFSKQLAAVAAKVPERYEETRDKIMGLYSYYKAADEGTNQP* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2548 489 PANTHER OS02G0262500 PROTEIN 229 300 - -
Ahy1g2548 489 Pfam MULE transposase domain 165 217 IPR018289 -
Ahy1g2548 489 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 229 300 IPR031052 GO:0006355
Ahy1g2548 489 Pfam SWIM zinc finger 384 403 IPR007527 GO:0008270
Ahy1g2548 489 Pfam FAR1 DNA-binding domain 3 45 IPR004330 -
Ahy1g2548 489 ProSiteProfiles Zinc finger SWIM-type profile. 369 407 IPR007527 GO:0008270
Ahy1g2548 489 PANTHER OS02G0262500 PROTEIN 4 221 - -
Ahy1g2548 489 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 4 221 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2548 Ahy-Chr1 104064206 104065891 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy1g2548 MULE 1.10E-11 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2548 - K17604 adu:107467184 947.962