Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2545 ATGAAGCTCGACAACTCCAACAACTCCAACGGCCAGATTTCCGCCGGCGCCGACGACGACGTATTCGTGCCGCCGCTCAACTTCGCCATGGTCGATCAAGGCATTTTTAGGTCTGGTTTTCCCGACTCTGCCAACTTCAGCTTCTTAAAATCCCTTCGTCTCCGCACTGTTATATGTTTGTGCCCTGAACCGTATCCAGAAGTGACTTCTGAATTTCTCAAGGCCAACGGAATAAAGCTTTATCAATTCGGGATCGATGGATGTAAGGAACCCTTTGTCAACATCCCAGATGACACAGTTCGTGAAGCTTTGAAAGTAGTCCTCGATGTCAGGAACCACCCAGTACTAATTCATTGTAAACGAGGGAAGCATCGCACTGGTTGCCTTGTGGGATGCATCAGAAGATTGCAGAAATGGTGCCTATCTTCTGTATTTGATGAGTACCAAAGGTTTGCAGGCGCCAAGGCCAGAGTTTCGGATCAGAGGTTCATCGAATTGTTTGATATTTCTTGTCTCAAGTCCAACCCGCTCTCATTTTCATGCTCCGGGAAATAG 555 0.4757 MKLDNSNNSNGQISAGADDDVFVPPLNFAMVDQGIFRSGFPDSANFSFLKSLRLRTVICLCPEPYPEVTSEFLKANGIKLYQFGIDGCKEPFVNIPDDTVREALKVVLDVRNHPVLIHCKRGKHRTGCLVGCIRRLQKWCLSSVFDEYQRFAGAKARVSDQRFIELFDISCLKSNPLSFSCSGK* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2545 184 ProSitePatterns Tyrosine specific protein phosphatases active site. 117 127 IPR016130 GO:0016311|GO:0016791
Ahy1g2545 184 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 22 169 IPR029021 -
Ahy1g2545 184 PANTHER TYROSINE-PROTEIN PHOSPHATASE 14 182 - -
Ahy1g2545 184 PRINTS Plant and fungal dual specificity phosphatase signature 22 39 IPR020428 GO:0016791
Ahy1g2545 184 PRINTS Plant and fungal dual specificity phosphatase signature 59 72 IPR020428 GO:0016791
Ahy1g2545 184 PRINTS Plant and fungal dual specificity phosphatase signature 95 109 IPR020428 GO:0016791
Ahy1g2545 184 PRINTS Plant and fungal dual specificity phosphatase signature 78 92 IPR020428 GO:0016791
Ahy1g2545 184 ProSiteProfiles Dual specificity protein phosphatase domain profile. 27 181 IPR020422 GO:0006470|GO:0008138
Ahy1g2545 184 PANTHER TYROSINE-PROTEIN PHOSPHATASE DSP1 14 182 - -
Ahy1g2545 184 CDD PFA-DSP_Siw14 22 168 - -
Ahy1g2545 184 Pfam Tyrosine phosphatase family 23 175 IPR004861 -
Ahy1g2545 184 Gene3D Protein tyrosine phosphatase superfamily 21 171 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2545 Ahy-Chr1 104022070 104025397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2545 5 184 Protein tyrosine phosphatase (PTP) family AT4G03960 70.000 3.14e-96 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2545 K18045 - gmx:100785520 324.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2311 11 136981926 136985448 Ahy1g2545 1 104022070 104025397 hybridization