Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2490 ATGAAGTCCCTCTTATATCCGACCCTGTTGTCATTGCTGCATTGGCACGTGGCGGTGGTATCAGCTACAAGGCTGAACATGGCTAGCGATGAATCGGCCTTGGTTGCCATGAGGGAGCATTTTAACTCCTTGGATCCCAACAATGTGCTCGCAAGCAACTGGTCTAGCACTACCTCTGTTTGCAACTGGATTGGCGTCACATGCGGCTCTTCCCACCGCAGAGTAACCGCCTTGAATCTCTCATACATGGCTCTTGATGCCACCATCCCTCCGCATCTTGGAAACCTGTCATTTCTTTCTTGCCTGCGTCTTCCCAACAATAGCTTCCATGGTACTCTACCTGCTGAACTTGCTGGATTACGTAGACTGAGCATCATCAACCTCAGATTCAACAAATTCACAGGAAGCATCCCGTCCTGGTTTGAAACTCTACCCAAACTAGAATACCTGCTACTGAGAGGGAACAGTTTCTCTGGCACAGTCCCACACTTTCTGTTCAACATGACTTCCCTGCAATATCTTGTACTTTCTGATAACCAGTTTTGGGGAGCTATCCCTTCAGCTATCATCAACAGTTCGTTACTGCAGGTTATTGAACTCAACTACAATAACCTATCCGGACAACTGCCGGAGCGCATCTTCCACCATCTTCCAAACTTGAAAGGGCTTTACGTGACTAGTAATTCCTTATCCGGTGAACTTCCACGCAGTTTGTTCGATTGCAAGCAACTGCAATATTTATCCTTATCCTACAACACCTTCGGTGGAAACATACCATCTGCCATCGGGAATTTGACAAGCCTCAAAGAGATCTATCTTGGCTATAACAATTTCAGAGGTGCAATACCATATGAGTTTGGTAATCTACGTAGTTTAGAGATTCTGAGTCTTCCTTTCGCCAATGTGAGTGGCTACATTCCGCCATCAATCTATAATATTTCTACCCTACAGGTAATTAGTATTACTGGAAATCATTTATCAGGCAGCCTGCCAGCAAGCCTAGGCTCCATGCTTCCAAAACTTGTTGGGCTGTACATGGGGATTAATTATCTCAGTGGAAGAATCCCAAGCTCCTTATGCAATGCCACTATGCTTAATACCATAGATTTGGCTTACAATTCATTTTCTGGATACATTCCAGACATTTTTGGCAGCTTAAGAAGTCTCCAGCTGCTCAATCTTGGTAAAAATAATTTGACAAGTGATTCATCCGATTCAGAGCTAAGCATTATAAATTCTTTGACAAATTGTAGATTTCTCAAAGAGTTGACATTTTCTCGAAATCCATTGGATTCCATTCTTCCAATATCGGTAGGAAACCTTTCTACTTCTCTGGTTGACTTGAATCTTCGGGGTTGTTCAATGAGAGGCACCATTCCAGCAAGTATTGGCAACTTGAGCAGCTTGATAAAACTTGACCTTGGTACTAATAATTTTGTTGGAACCTTTCCTACTAGCATAGGGAAATTAATAAAGCTACAAGGCTTCTATTTACATGACAACCAATTGGAAGGATTTGTTCCGAATCAATTGTGTCAATTAACGAGCTTGGATTCATTTGCCGTTAAAAGCAACAAGTTCTCTGGCCCTATACCTTCTTGCTTAGGGAATCTTACCTCATTGAGATGGCTTTGGCTTTCTTCAAATGAATTCAACTCAATACCTTCCACCTTGTGGGAGCTGTCCAATTTATTGCATTTAGACTTATCTTCCAATAATTTAAGTGGATATCTCCCATTAGAGAGTGGAAATCTAAAAGCCATAAGTTGGATGTATTTATCAGGAAATCAATTTTCAGGTAGCATCCCAAGAAGCCTCAGCAATCTTATGAATTTGGCTCTTCTTACCTTAGCAAGAAACAAATTTGAAGGGCCCATCCCAGAATCATTTGGTCGTATGGTAAGTTTGGAACTCCTTGATTTATCAGAAAATAACTTGTTTGGTGTCATTCCCAAAACATTGGAGGCACTTATATATCTGAAATATTTCAATATTTCTCACAATAAGTTAAAAGGAAAAATCCCTGATGGGGGACCTTTTGCAAACTTCTCAGCTCAGTCGTTCATGGGGAATAAAGGGTTATGTGGTGCTCCACGTTTCCATTTTTCGGAATGTAAAATTGAAAAATCCCGAAAATGGAATGCACATATTGTGTTGACATATATTTTACCTGCAGCAATAGTTACCACCCTTCTTGTGGCATTCCTTTGCATCCTAAAATTCCGGAAGCACAAGGTGGTCAACAATTCAGAGGTGAATCAATCAGAAGCAAGATGGAGAAGAATATCATACTATGAAATTCAGCAAGCAATAGATAGGTTCAATGATGGCAACTTGCTTGGTGTAGGGAGTTTTGGAAGAGTGTATAAAGGAGTACTCTCAGATGGGACGAATGTTGCAGTAAAAGTGTATAATCTGGGGCTAGAAGGAGCATTTAGGAGTTTTGATGCTGAATGTGAGATATTGCGCAGTGTCCGCCATCGAAACTTAACCAAAATCATTAGCAGCTGCAGCAACATGGACTTCAAGGCATTGATCCTAAGCCTCATGCCTAATGGGAGTTTAGAGAGGTGGCTACACTCGGAACACCATGGCTTGAGTATGATCCAGAGGCTAAACATAATGATAGATGTTGCAGAAGCAATGGATTACCTGCATAATGGTGGTTCTGTACCAATTATAGACTGTGATTTGAAACCCAGCAACATATTACTAGATGAAGACATGGTTGCCCATGTGGCTGATTTTGGCATTGCAAAATTGCTGAGTGGGGATGACTCCATCACTCAAACCATGAATCTAGCCACAATAGGCTATATGGCCCCTGAATATGGACTTGAGGGAAGAGTGTCTAGGCAAGGTGATGTGTATAGCTATGGAATTTTACTTATGGAGACCTTCACACAGAAAAAACCCACTGATGAAATGTTTGTGGGAGAGTTTAGCATCAAAGAGTGGGTGAAAATGTCGTGCCCTGATTCACTACTTGATATCATTGATGCAAAATTATTGGTGGAAGAAGGAGAAACAGATACTAAACAGGACTGCTTGTTGTCTATAATGACTTTAGCTCTGAATTGCTCAGCTGAGTCTCCGGTTGAAAGGACAAGAATGAAAGACGCTATGAATGCTCTTAAGAAGATTAAAAGATTACTCTTGAACTAA 3165 0.4126 MKSLLYPTLLSLLHWHVAVVSATRLNMASDESALVAMREHFNSLDPNNVLASNWSSTTSVCNWIGVTCGSSHRRVTALNLSYMALDATIPPHLGNLSFLSCLRLPNNSFHGTLPAELAGLRRLSIINLRFNKFTGSIPSWFETLPKLEYLLLRGNSFSGTVPHFLFNMTSLQYLVLSDNQFWGAIPSAIINSSLLQVIELNYNNLSGQLPERIFHHLPNLKGLYVTSNSLSGELPRSLFDCKQLQYLSLSYNTFGGNIPSAIGNLTSLKEIYLGYNNFRGAIPYEFGNLRSLEILSLPFANVSGYIPPSIYNISTLQVISITGNHLSGSLPASLGSMLPKLVGLYMGINYLSGRIPSSLCNATMLNTIDLAYNSFSGYIPDIFGSLRSLQLLNLGKNNLTSDSSDSELSIINSLTNCRFLKELTFSRNPLDSILPISVGNLSTSLVDLNLRGCSMRGTIPASIGNLSSLIKLDLGTNNFVGTFPTSIGKLIKLQGFYLHDNQLEGFVPNQLCQLTSLDSFAVKSNKFSGPIPSCLGNLTSLRWLWLSSNEFNSIPSTLWELSNLLHLDLSSNNLSGYLPLESGNLKAISWMYLSGNQFSGSIPRSLSNLMNLALLTLARNKFEGPIPESFGRMVSLELLDLSENNLFGVIPKTLEALIYLKYFNISHNKLKGKIPDGGPFANFSAQSFMGNKGLCGAPRFHFSECKIEKSRKWNAHIVLTYILPAAIVTTLLVAFLCILKFRKHKVVNNSEVNQSEARWRRISYYEIQQAIDRFNDGNLLGVGSFGRVYKGVLSDGTNVAVKVYNLGLEGAFRSFDAECEILRSVRHRNLTKIISSCSNMDFKALILSLMPNGSLERWLHSEHHGLSMIQRLNIMIDVAEAMDYLHNGGSVPIIDCDLKPSNILLDEDMVAHVADFGIAKLLSGDDSITQTMNLATIGYMAPEYGLEGRVSRQGDVYSYGILLMETFTQKKPTDEMFVGEFSIKEWVKMSCPDSLLDIIDAKLLVEEGETDTKQDCLLSIMTLALNCSAESPVERTRMKDAMNALKKIKRLLLN* 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2490 1054 Gene3D Ribonuclease Inhibitor 401 714 IPR032675 -
Ahy1g2490 1054 SUPERFAMILY L domain-like 414 699 - -
Ahy1g2490 1054 ProSitePatterns Protein kinases ATP-binding region signature. 780 802 IPR017441 GO:0005524
Ahy1g2490 1054 SUPERFAMILY Protein kinase-like (PK-like) 748 1045 IPR011009 -
Ahy1g2490 1054 Gene3D Ribonuclease Inhibitor 27 194 IPR032675 -
Ahy1g2490 1054 Gene3D Phosphorylase Kinase; domain 1 744 848 - -
Ahy1g2490 1054 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Ahy1g2490 1054 Gene3D Ribonuclease Inhibitor 195 400 IPR032675 -
Ahy1g2490 1054 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 144 259 - -
Ahy1g2490 1054 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 4 144 - -
Ahy1g2490 1054 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 241 1049 - -
Ahy1g2490 1054 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 4 144 - -
Ahy1g2490 1054 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 241 1049 - -
Ahy1g2490 1054 SMART serkin_6 774 1052 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g2490 1054 PRINTS Leucine-rich repeat signature 564 577 - -
Ahy1g2490 1054 PRINTS Leucine-rich repeat signature 633 646 - -
Ahy1g2490 1054 SMART LRR_typ_2 490 514 IPR003591 -
Ahy1g2490 1054 SMART LRR_typ_2 265 288 IPR003591 -
Ahy1g2490 1054 SMART LRR_typ_2 193 216 IPR003591 -
Ahy1g2490 1054 SMART LRR_typ_2 386 409 IPR003591 -
Ahy1g2490 1054 SMART LRR_typ_2 217 241 IPR003591 -
Ahy1g2490 1054 SMART LRR_typ_2 144 168 IPR003591 -
Ahy1g2490 1054 SMART LRR_typ_2 561 585 IPR003591 -
Ahy1g2490 1054 SMART LRR_typ_2 633 656 IPR003591 -
Ahy1g2490 1054 SMART LRR_typ_2 538 560 IPR003591 -
Ahy1g2490 1054 Gene3D Transferase(Phosphotransferase) domain 1 850 1052 - -
Ahy1g2490 1054 Pfam Protein tyrosine and serine/threonine kinase 778 1043 IPR001245 GO:0004672|GO:0006468
Ahy1g2490 1054 Pfam Leucine rich repeat 540 598 IPR001611 GO:0005515
Ahy1g2490 1054 Pfam Leucine rich repeat 195 252 IPR001611 GO:0005515
Ahy1g2490 1054 Pfam Leucine rich repeat 611 670 IPR001611 GO:0005515
Ahy1g2490 1054 Pfam Leucine rich repeat 121 181 IPR001611 GO:0005515
Ahy1g2490 1054 ProSiteProfiles Leucine-rich repeat profile. 540 562 IPR001611 GO:0005515
Ahy1g2490 1054 SUPERFAMILY L domain-like 54 400 - -
Ahy1g2490 1054 ProSiteProfiles Protein kinase domain profile. 774 1052 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g2490 1054 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 144 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2490 Ahy-Chr1 103322863 103326462 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2490 29 1050 Receptor kinase-like Gene Family AT3G47570 36.528 0.0 602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Ahy1g2490 PK_Tyr_Ser-Thr 1.60E-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2490 - - aip:107613554 1880.14