Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2473 ATGATGATGATGATGATGAGTGTTAATAACTCGGTGTCATGTGGATGCAAGCCCCTACTCATGACCATGGAGTCCCTCTTCCACCACCGCATCACCACCAAGGAGAAGGTTGTGGTGGTCATTGGCGCCACCGGCACCGGCAAGTCCAAGCTAGCCATTGACATAGCCACTCACTTCAAACCGGCGGAGATTGTCAACTCCGACAAAATTCAAGTCTTCAAAGGCCTCAACATCACCACTAACAAGGTCACAGAGGAAGAGTCTCGTGGGGTCCCACACCACCTTCTTGGTTTCGTTGACGATGACGACTTCACAGCCACACAATTCTCTCACGAAGCAACCAGAGCCGTTGATTCAATCGTGCAGCGAAACGCTCTTCCCATCATTGCCGGTGGTTCTAACTCCTTCATTGACCACTTGGTCAACCACCATGACCACTTTCGTTTAAGGTACGACTGCTGCTTCCTCTGGGTCGACGTTTCCCTCCCCGTCCTCCATTCCTCTTTGGAACGCCGCGTTGACAAAATGATTCAGGCCGGTCAAGTCAACGAAGTTCGCGATTTCTTTGACCCTTCCGGAGACTACTCCAGAGGGATTCGGAGGGCCATTGGAGTCCCCGAGTTTCACCAATTTCTTCAAGCCGAGTCCATGGAAGCAGACCAGGAAACCAAGAACAGGCTTCTAGAAGACGCCATTGCCACCATCAAGCTCAACAACTGCAAGCTCGCCAACCGCCAGCTACACAAGATTCAGCGCCTCCACGCCGTGTGGAAGAGAAACATGCACCGCCTCGACGCCACTCAGGCTTTTCTTAACACACAAGAAGCCGCTTGGGAGGATCACGTGGTGGCTAAAGCTATAAGGATCGTGCAGAGGTTCTTGTACGACGAAACTCATCAACATGTTGTTCCGCCGCTTGTGTCCTCTCCGGCTTCGCCGCCAGCAGCCGCCATGGCCGCGGTAACACATTAG 972 0.5288 MMMMMMSVNNSVSCGCKPLLMTMESLFHHRITTKEKVVVVIGATGTGKSKLAIDIATHFKPAEIVNSDKIQVFKGLNITTNKVTEEESRGVPHHLLGFVDDDDFTATQFSHEATRAVDSIVQRNALPIIAGGSNSFIDHLVNHHDHFRLRYDCCFLWVDVSLPVLHSSLERRVDKMIQAGQVNEVRDFFDPSGDYSRGIRRAIGVPEFHQFLQAESMEADQETKNRLLEDAIATIKLNNCKLANRQLHKIQRLHAVWKRNMHRLDATQAFLNTQEAAWEDHVVAKAIRIVQRFLYDETHQHVVPPLVSSPASPPAAAMAAVTH* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2473 323 Gene3D - 34 294 IPR027417 -
Ahy1g2473 323 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 150 IPR027417 -
Ahy1g2473 323 Pfam IPP transferase 148 248 - -
Ahy1g2473 323 Pfam IPP transferase 71 144 - -
Ahy1g2473 323 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 162 261 - -
Ahy1g2473 323 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 25 301 - -
Ahy1g2473 323 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 25 301 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2473 Ahy-Chr1 103112564 103114150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2473 150 304 C2H2 Transcription Factor Family AT2G27760 34.807 6.45e-24 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2473 K10760 - gmx:100812928 387.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2438 11 139238442 139240137 Ahy1g2473 1 103112564 103114150 hybridization
Ahy1g2473 1 103112564 103114150 Ahy14g0405 14 5337860 5339908 PCT
Ahy1g2473 1 103112564 103114150 Ahy4g0321 4 3995332 3997755 PCT
Ahy14g0405 14 5337860 5339908 Ahy1g2473 1 103112564 103114150 PCT
Ahy4g0321 4 3995332 3997755 Ahy1g2473 1 103112564 103114150 PCT