Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2409 ATGAAAGGTGATAGCGAGTGTGGTGGTTCTTCAATGCCGGCGGAGCGTAACAGAAGGCTGAAGATGAATCGCCTCTTCACTCAGCTTCAGGCCACCATCCCACGCCCCCTTTCCAAGGCTACAAAGGAAGTCGTTATAACGGAAACGATTAGGTACATAAAGGAGCTTGAGAGGAAGAAGAACAACTTGGAGCAGATCAAGGAACTACAAATTCAAAGCCATGCCAGTGGTACCACCTTCATGCTTCCATGCATGGCCGATGCTGATAATTGCTCTGTCACTGTCACTGTCTCCGCCAACGTCGCGTTTTTCGGCATTCAGACCGTGGCTCGCCGAGGTTTGATTACCATGATTTTGGAGGTGTTCAGCAACCACAAGGCTGAGATTTTGGCTGCAAATGTGGCGGTTAATGAAGGGATTTTGACATTTGCAGTCACTGCTCTATTGCAAATTGTTGCTGATGGGGAAGGAGAAGGAGAAGGAGAAGGGGCTGTTGAGATGATTAAGAGAGAGATCATGACTTTGTAG 528 0.4811 MKGDSECGGSSMPAERNRRLKMNRLFTQLQATIPRPLSKATKEVVITETIRYIKELERKKNNLEQIKELQIQSHASGTTFMLPCMADADNCSVTVTVSANVAFFGIQTVARRGLITMILEVFSNHKAEILAANVAVNEGILTFAVTALLQIVADGEGEGEGEGAVEMIKREIMTL* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2409 175 CDD bHLH_SF 15 58 - -
Ahy1g2409 175 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 14 78 IPR036638 GO:0046983
Ahy1g2409 175 Coils Coil 46 73 - -
Ahy1g2409 175 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 6 56 IPR011598 GO:0046983
Ahy1g2409 175 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 9 173 - -
Ahy1g2409 175 Gene3D - 10 79 IPR036638 GO:0046983
Ahy1g2409 175 SMART finulus 12 62 IPR011598 GO:0046983
Ahy1g2409 175 Pfam Helix-loop-helix DNA-binding domain 14 57 IPR011598 GO:0046983
Ahy1g2409 175 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 9 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2409 Ahy-Chr1 102195875 102197315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2409 8 145 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 26.506 5.38e-06 43.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy1g2409 HLH 8.60E-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2409 - - ahf:112704712 330.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2514 11 140923556 140924856 Ahy1g2409 1 102195875 102197315 hybridization