Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2396 ATGAGGGGATCTTATAACAAAAACCTGTTCTTGTACCACCTCACTGTCATCACAAGAACCTCATCACCCTCATTTCTGATCCCTTCACCATCTTCCATATTCCGTGCTCCCAATTACGCCACAGTCACAGAAACCCTGGAAAATCAATCCTTTACGGTGAATTACCTCGTCAACAATTGTGGATTCCTCCCAGATTCGGCTCTTCATGCTTCAAAATACGTACTTTTTAAGACTCCAGAGAAACCCGACTCAGTCATCGCACTCTTCAGGAGCTTCGGTTTCTCAGATTTGCAAATTCACAATGTCATTCGGAAAAAGCCCCGGATTCTCGTCAGCAAACCCAAAGAGACCATCTTGCCCAAGCTCGAGTTCCTCACCTCCAAAGGTGTTTCAAAATCACAACTTGCCCGCCTCATCGATCTCAACCCTCAAATCTTGCAAAGAAGCTTAGAGAAACACCTAATCCCCACTTTCGATTTGTTGAACAATTTCATTCGTTCTGAAGAAAGGACCATTGCTTCTATTTTACACTCTGTCCAAATTTTAACTTCTGCAACGTCGCATCGGAATATTAACTTGCTGGTTGATTTAGGTGTCCGTGAGAGAAGCTTGGCAAGGCTACTTTGCCACTGGCCTTGGTTGCTTCTGTTCAATTCTAAAGACCTTAAGAGTATGGTAGATGAAGTCATTAAAATGGGGGTTGATCCCAGCAAGGCTAATTTTGTTCCTGCATTGTATGCTAAGCTGCTTCCAAAGTCCATGTGGGATAGGAAAGTTGAGTTGTACAAGAGGTTTGGATTAACTGATGACAACATTCGTGAGGCTTTTGTGAAGCACCCTTTCTGTATGCTCAAATCTGTGCAGAAAATTGAGGCCTGCATTGAATTCTTTGTCAAAGAACTCGGTTGGAAGCCTGTTGATGTCACCAATTATCCGGTTCTTCTCTCGCTGAATTTGGAGAAAAGGCTTGTTCCCAGGGCTGCTGTCTTGAAGATTCTTATGGCCAATGGTGTCATTAAGAGTTGTAGGCATTTGTTAGCATATACTGTTTCGGAAGAGATGTTCTTTAAGAATTATGTGAATCGTGATAAGGATCAAGCACCGGAGTTATTGAAGCTGTATCGGGAGAAAATGAATCTTCCAGTAATGGATAGTAAATTGATGTCTTGA 1170 0.4248 MRGSYNKNLFLYHLTVITRTSSPSFLIPSPSSIFRAPNYATVTETLENQSFTVNYLVNNCGFLPDSALHASKYVLFKTPEKPDSVIALFRSFGFSDLQIHNVIRKKPRILVSKPKETILPKLEFLTSKGVSKSQLARLIDLNPQILQRSLEKHLIPTFDLLNNFIRSEERTIASILHSVQILTSATSHRNINLLVDLGVRERSLARLLCHWPWLLLFNSKDLKSMVDEVIKMGVDPSKANFVPALYAKLLPKSMWDRKVELYKRFGLTDDNIREAFVKHPFCMLKSVQKIEACIEFFVKELGWKPVDVTNYPVLLSLNLEKRLVPRAAVLKILMANGVIKSCRHLLAYTVSEEMFFKNYVNRDKDQAPELLKLYREKMNLPVMDSKLMS* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2396 389 Pfam mTERF 87 209 IPR003690 GO:0003690|GO:0006355
Ahy1g2396 389 Pfam mTERF 188 349 IPR003690 GO:0003690|GO:0006355
Ahy1g2396 389 SMART mt_12 205 235 IPR003690 GO:0003690|GO:0006355
Ahy1g2396 389 SMART mt_12 100 131 IPR003690 GO:0003690|GO:0006355
Ahy1g2396 389 SMART mt_12 273 304 IPR003690 GO:0003690|GO:0006355
Ahy1g2396 389 SMART mt_12 305 336 IPR003690 GO:0003690|GO:0006355
Ahy1g2396 389 SMART mt_12 136 167 IPR003690 GO:0003690|GO:0006355
Ahy1g2396 389 Gene3D Transcription termination factor 3, mitochondrial 61 187 IPR038538 -
Ahy1g2396 389 Gene3D Transcription termination factor 3, mitochondrial 188 372 IPR038538 -
Ahy1g2396 389 PANTHER CGI-12 PROTEIN-RELATED 39 380 IPR003690 GO:0003690|GO:0006355
Ahy1g2396 389 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 39 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2396 Ahy-Chr1 102067251 102068420 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Ahy1g2396 mTERF 5.10E-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2396 K15032 - pvy:116121303 297.36