Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2395 ATGCGGGGATGTTATAACAAAAACCTGTTCTTGTACCACCTCACTGTCATCACAAGAACCCCATCACCCTCCTTTCTGATCCCTTCATCCCCTTCCCCTGTCCGTGCTCCCAATTACAGCACACTCACAAAAACCCCGGAAATACAATCCTTTTCGGTGAATTACCTCGTCAACAAGTGCGGGTTCCTCCCAGATTCCGCTCTTCGTGCTTCGAAGTACGTCCTTTTTAAGAGTCCCGAGAAACCCGACTCAGTCATCGCACTCTTCAGGAGCTTCGGTTTCTCAGATTTGCAGATTCACAATGTCATTCAGAAATCGCCCAGGGTTCTCCTCAGCAAGCCCAAAGAGACCATCTTGCCCAAGCTCCAGTTCCTCATCTCCAAAGGCGCTTCAAAATCACAACTTGCCCGCATCATCGAGCTCAACCCTGTAATCTTGCAAAGAAGCTTAAAGAAACACCTAATCCCCACTTTCGATTTGTTGAACAATTTCCTTCGTTCTGAAGAAAGGACCGTTGCTTCTATTTTACATTCTGTCCAAATTTTAACTTCTTCAACGTCGCATCGAAATCTTAATTTGCTGGTTGATTTAGGGGTCAGTGAGAGAAGCATGGCAAGGCTACTTCACCAATGGCCTTGGTTGCTTCGATTCAATTCTGCAGGCCTTAAGAGTATGGTAGATGAAGTCATTAAAATGGGGGTTGATCCCGCCAAGGCTAATTTTGTTCCTGCGTTGTATGCTAAGCTGCTTCCAAAGTCCATGTGGGATAGGAAAGTTGAGTTGTACAAGAGGTTTGGATTAACTGATGACAACATTCGTGAGGCTTTTGTGAAGCACCCTTTCTGTATGCTCAAATCTGTGCAGAAAATTGAGGCCTGCATTGAATTCTTTGTCAAAGAACTCGGTTGGAAGCCTGTTGATGTCACCAATTATCCGGTTCTTCTCTCGCTGAATTTGGAGAAAAGGCTTGTTCCCAGGGCTGCTGTCTTGAAGATTCTTATGGCCAATGGTGTCATTAAGAGTTGTCGGCATTTGTTAGCATATACTGTTTCGGAAGAGATGTTCTTTAAGAATTATGTGAATCGTGGGGAAGATGAATATAATTCTCTCCACATTTGTCTGTAA 1125 0.4436 MRGCYNKNLFLYHLTVITRTPSPSFLIPSSPSPVRAPNYSTLTKTPEIQSFSVNYLVNKCGFLPDSALRASKYVLFKSPEKPDSVIALFRSFGFSDLQIHNVIQKSPRVLLSKPKETILPKLQFLISKGASKSQLARIIELNPVILQRSLKKHLIPTFDLLNNFLRSEERTVASILHSVQILTSSTSHRNLNLLVDLGVSERSMARLLHQWPWLLRFNSAGLKSMVDEVIKMGVDPAKANFVPALYAKLLPKSMWDRKVELYKRFGLTDDNIREAFVKHPFCMLKSVQKIEACIEFFVKELGWKPVDVTNYPVLLSLNLEKRLVPRAAVLKILMANGVIKSCRHLLAYTVSEEMFFKNYVNRGEDEYNSLHICL* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2395 374 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 45 367 - -
Ahy1g2395 374 PANTHER CGI-12 PROTEIN-RELATED 45 367 IPR003690 GO:0003690|GO:0006355
Ahy1g2395 374 Gene3D Transcription termination factor 3, mitochondrial 189 371 IPR038538 -
Ahy1g2395 374 Gene3D Transcription termination factor 3, mitochondrial 57 188 IPR038538 -
Ahy1g2395 374 Pfam mTERF 87 218 IPR003690 GO:0003690|GO:0006355
Ahy1g2395 374 Pfam mTERF 188 349 IPR003690 GO:0003690|GO:0006355
Ahy1g2395 374 SMART mt_12 136 167 IPR003690 GO:0003690|GO:0006355
Ahy1g2395 374 SMART mt_12 273 304 IPR003690 GO:0003690|GO:0006355
Ahy1g2395 374 SMART mt_12 305 336 IPR003690 GO:0003690|GO:0006355
Ahy1g2395 374 SMART mt_12 205 235 IPR003690 GO:0003690|GO:0006355
Ahy1g2395 374 SMART mt_12 100 131 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2395 Ahy-Chr1 102045558 102047360 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Ahy1g2395 mTERF 9.10E-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2395 K15032 - pvy:116121303 257.299