Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2393 ATGTCAAACTCTAGAACCTCATCAGATACACTACACACTCCCTCCTTCATGAAGGGATATGAAGAAGCAAACAACAACAATCAAAACCAGAACCAAATATGCTTGTCTACACTTCTCCAAAGAAACACATCAACATCATCATCATCATGTGGTGAAAAAAGAGGGAGAAGGAAACAAGCAGAGCCAGGTAGGTTTCTTGGTGTGAGAAGAAGACCTTGGGGAAGATATGCTGCTGAGATCAGAGACCCTACAACCAAAGAAAGACATTGGCTTGGTACCTTTGACACTGCTCAAGAAGCTGCTCTTGCTTATGACAGAGCTGCTTTGTCCATGAAAGGAAACCAAGCTAGAACTAACTTCATCTATTCTGATAACATCAACTTCCATGCTCTTCTCACACCAATGGATCTTCAAGCTCTCTTGCCACCACCACCTCCTCCTCCTCCCCCACCATCTTCTTACACTAAACAACTTGCACCTTCCAATCAGAATAAGATTAAGAACAGTAATAGTAATACTAATGTTGTTGCTGCTGCATATGGTTGTTCAGTTCAGGATAATGATAACTTGTTCTTTTCAACAACTGATCATCATAGTAATAACAACAACTCTGGATATCTTGAATGCATAGTTCCTGATAAATGTTTCAGGCCTACTGCTACTACTACTACTGCTGATTCAAGTTCCAACAGTAGTTGTTCAAACAACAACAACTACTCATCAAGAAAGAGCAATGTCAGTGAAAACTCATCATCATTCTCTTGTGATAATAACTTTCCATCAGATTACTTCTGTTATCCAACAAGTGAAGGGTTCTCATCATGGGATTGGAGCTGCAGTGAGCTTTCAGCTATATTTAACAATTCATCATCATCATCATCATCATCATCAAGAAGGGTATTAGAAGGAGGAGGATGCATGGATGCACTGTATCCCATCATAACTGATGAGAACAATAATAACAATACAAGCTTCTATGATGGGGTGATGATGAATAATCATCATAATCATAATAATGCTGCTGCTTCATCTTCTTCAACAAACTGCTCAGTAGACATGGGATACCCACTCTTCTGA 1077 0.3946 MSNSRTSSDTLHTPSFMKGYEEANNNNQNQNQICLSTLLQRNTSTSSSSCGEKRGRRKQAEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAQEAALAYDRAALSMKGNQARTNFIYSDNINFHALLTPMDLQALLPPPPPPPPPPSSYTKQLAPSNQNKIKNSNSNTNVVAAAYGCSVQDNDNLFFSTTDHHSNNNNSGYLECIVPDKCFRPTATTTTADSSSNSSCSNNNNYSSRKSNVSENSSSFSCDNNFPSDYFCYPTSEGFSSWDWSCSELSAIFNNSSSSSSSSSRRVLEGGGCMDALYPIITDENNNNNTSFYDGVMMNNHHNHNNAAASSSSTNCSVDMGYPLF* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2393 358 MobiDBLite consensus disorder prediction 138 155 - -
Ahy1g2393 358 MobiDBLite consensus disorder prediction 43 66 - -
Ahy1g2393 358 Pfam AP2 domain 67 113 IPR001471 GO:0003700|GO:0006355
Ahy1g2393 358 MobiDBLite consensus disorder prediction 1 23 - -
Ahy1g2393 358 MobiDBLite consensus disorder prediction 221 241 - -
Ahy1g2393 358 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF086 22 358 - -
Ahy1g2393 358 SUPERFAMILY DNA-binding domain 65 122 IPR016177 GO:0003677
Ahy1g2393 358 ProSiteProfiles AP2/ERF domain profile. 64 121 IPR001471 GO:0003700|GO:0006355
Ahy1g2393 358 MobiDBLite consensus disorder prediction 138 169 - -
Ahy1g2393 358 MobiDBLite consensus disorder prediction 51 65 - -
Ahy1g2393 358 PRINTS Ethylene responsive element binding protein signature 87 103 IPR001471 GO:0003700|GO:0006355
Ahy1g2393 358 PRINTS Ethylene responsive element binding protein signature 65 76 IPR001471 GO:0003700|GO:0006355
Ahy1g2393 358 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 22 358 - -
Ahy1g2393 358 SMART rav1_2 64 127 IPR001471 GO:0003700|GO:0006355
Ahy1g2393 358 CDD AP2 64 120 IPR001471 GO:0003700|GO:0006355
Ahy1g2393 358 Gene3D AP2/ERF domain 64 122 IPR036955 GO:0003700|GO:0006355
Ahy1g2393 358 SUPERFAMILY Formin homology 2 domain (FH2 domain) 142 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2393 Ahy-Chr1 102020374 102021450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2393 30 308 AP2-EREBP Transcription Factor Family AT5G18560 39.198 1.60e-57 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy1g2393 AP2 1.60E-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2393 - - aip:110263494 562.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2532 11 141155087 141156525 Ahy1g2393 1 102020374 102021450 hybridization
Ahy1g2393 1 102020374 102021450 Ahy20g0174 20 1466952 1468489 PCT
Ahy1g2393 1 102020374 102021450 Ahy10g0010 10 190763 191836 PCT
Ahy20g0174 20 1466952 1468489 Ahy1g2393 1 102020374 102021450 PCT
Ahy10g0010 10 190763 191836 Ahy1g2393 1 102020374 102021450 PCT