Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2383 ATGTTTCACTCAAAGCATGACTCTCTTAGAAGAGCTCTTCTCTTCATCCTCAGCCACAACCCCCCTCTTCCATCGCCATCCACAAAATCTTACCTTCTTCTTCTTCGGCCACAAAAAAGCCGCCACTCAACCACCTCCACTTCCGATGACCACCACTCTTTCACTGTCTCCTACCTCACCACCAAGTGCGGCTTCTCCCATGAAGACGCTCTCAGAGCAAACAAGCGCGTTCGCTTTGACACCCCCGTCAAGCCAGATTCCGTCATCTCCTTCTTCAAAGCCCACGGTTTCTCACTCTCCCAAACCACCACCATCATGTGCAAGATTCCCGTGGTGCTCACATATGACCCTACCAAAGCGATCTTGCCAAAGTTTCAATTTTTGGCATCCAAAGGTGCTTCTCCCTCTGACATTGTACTCATGACCACAAAGAGTCCCAACTTCTTGCTTCGAAGCCTTAACCATATAGTATCCTTCTACGAATTGGTAAGGAGGTTCTCTCCCTCTGATCTTAAAGCCATTGCTTATCTAACTGGATGCCCATCATCCATTCCTGATGTTCGTGTGCCTCAAAATGTGAAAATGCTGCTTGATGAAGGGTTGACCAATGCCAACATTCACCATTTGCTTAGAACTAGGCCTTCTGTGCTGTCCTCTGCTGATTTGAAGAAAACAGTTGAGGAAGTGAAGCAATTGGGGTTTGATCCTTCACAGTGTAATTTCAGTGTGGTGTTGCTGGCCAAAAAGTCCGTAACTAAGTCCCAATGGGATGCTAAAGTTGATGTCCTTAAGAAATGGGGCTGGTCTGAACAAGATTTTTCGGAGGCCTTTAGGAGGCACCCTCATTTTATGCTATGTTCCGAGGACAAACTCAATGCAGTGATGAGCTTTTGGATCAGTAATCTCGGCTGGGATTCTTCGGCATTTCGCATTAGACCGATGCTTTTTGGATACAGTTTGGAGAAGAGGCTTATTCCTAGAGCTAAGGTTGTCAAATATCTTCTCTCCAATGGTTTAATGAAGAAGAATGCTAGCATAATCACACCGTTTTCTTTGACTGAGGAGCTGTTCCTCAAGAGGTGTATCACATGTTTTGAGGAGAAAGATAGGTCTCGCCTATTAACACTATATCAGGGAGGGTGTTAG 1146 0.4572 MFHSKHDSLRRALLFILSHNPPLPSPSTKSYLLLLRPQKSRHSTTSTSDDHHSFTVSYLTTKCGFSHEDALRANKRVRFDTPVKPDSVISFFKAHGFSLSQTTTIMCKIPVVLTYDPTKAILPKFQFLASKGASPSDIVLMTTKSPNFLLRSLNHIVSFYELVRRFSPSDLKAIAYLTGCPSSIPDVRVPQNVKMLLDEGLTNANIHHLLRTRPSVLSSADLKKTVEEVKQLGFDPSQCNFSVVLLAKKSVTKSQWDAKVDVLKKWGWSEQDFSEAFRRHPHFMLCSEDKLNAVMSFWISNLGWDSSAFRIRPMLFGYSLEKRLIPRAKVVKYLLSNGLMKKNASIITPFSLTEELFLKRCITCFEEKDRSRLLTLYQGGC* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2383 381 Gene3D Transcription termination factor 3, mitochondrial 184 368 IPR038538 -
Ahy1g2383 381 Gene3D Transcription termination factor 3, mitochondrial 68 183 IPR038538 -
Ahy1g2383 381 PANTHER CGI-12 PROTEIN-RELATED 27 379 IPR003690 GO:0003690|GO:0006355
Ahy1g2383 381 Pfam mTERF 89 235 IPR003690 GO:0003690|GO:0006355
Ahy1g2383 381 Pfam mTERF 191 357 IPR003690 GO:0003690|GO:0006355
Ahy1g2383 381 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 27 379 - -
Ahy1g2383 381 SMART mt_12 306 340 IPR003690 GO:0003690|GO:0006355
Ahy1g2383 381 SMART mt_12 103 134 IPR003690 GO:0003690|GO:0006355
Ahy1g2383 381 SMART mt_12 207 235 IPR003690 GO:0003690|GO:0006355
Ahy1g2383 381 SMART mt_12 274 305 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2383 Ahy-Chr1 101904869 101906014 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Ahy1g2383 mTERF 3.40E-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2383 K15032 - gmx:102666739 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy1g2383 1 101904869 101906014 Ahy14g1081 14 19306608 19313837 PCT
Ahy14g1081 14 19306608 19313837 Ahy1g2383 1 101904869 101906014 PCT