Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2380 ATGTTTCATTCTAAGCATCACTCTCTTACAAGAGCTCTTCTCTTCTTCCTCGGCCACACCCCCCCTCTTCCATCGCCATCCACAAAATCTTACCTTCTTCTTCTTCGGCCACAAGCACGCCGCCACTCAACCACCTCCACTCCCGATGACCACCACTCTTTCACTGTCTCCTACCTCACCACCAAGTGCGGCTTCTCCCATGAAGATGCTCTCAGAGCGAACAAGCGCGTTCGCTTTGACACCCCCGTCAAGCCAGATTCCGTCATCTCCTTCTTCGAAGCCCACGGTTTCTCCCTCTCCCAAATCACCACCATCATGTGCAAGATTCCCGTGGTACTCACACGCGACCCCATCAAAGCGATCTTGCCAAAGTTTCAATTTTTGGCATCCAAAGGTGCTTCTCCCTCTGAAATTGTACTCATGACCACAAAGAGTCCCGGCTTCCTGCTTCGAAGCCTTAACCATATAGTATCCTTCTACGAATTGGTAAGGAGGTTCTCTCCCTCTGATCTTAAATCCGCTGCTTATCTAACTAGATGCCAATCCCTTTCTGATGTTCGTGTGGCTCAAAATGTGAAAATGCTGCTTGATGAAGGGTTGACCAATGCCAACATTCACCATTTGCTTAGAACTAGGCCTTCTTTGCTGTCCTCTGCTGATTTGAAGAAAACAGTTGAAGAAGTGAAGCAATTGGGGTTTGATCCTTCACAGTCTTATTTCAGTGTAGTGTTGCTGACCAAAAGGGTCATAACTAAGTCCCAGTGGGATGCTAAAGTTGATGTCCTTAAAAAATGGGGCTGGTCCGAACAAGATTTTTCGGAGGCCTATAGGAGGCACCCTCAATTCATGCTACGTTCCAAGGACAAACTCAATGCAGTGATGAGCTTTTGGATCAGTAATCTCGGCTGGGATTCTTCGGCGCTTCGCATTAGACCGGTGCTTTTTGGATACAGTTTGGAGAAGAGGCTTATTCCTAGAGCTAAGGTTATCAAATATCTTCTCTCCAATGGTTTGATGAAGAAGAATGCTAGCATAATCACACCATTGTATTTGACCGAGGAGCTGTTCCTCAAGAAGTGTGTCACATGTTTTGAGGAGAAAGATAGGTGGAAGGTGGCAGCTAAGAAATTATTGAGCGTAGGTGTTTCCTTGCAATATGGTGTGTGGATACAAATGAAAGTCCAAAGATTTTAG 1194 0.4615 MFHSKHHSLTRALLFFLGHTPPLPSPSTKSYLLLLRPQARRHSTTSTPDDHHSFTVSYLTTKCGFSHEDALRANKRVRFDTPVKPDSVISFFEAHGFSLSQITTIMCKIPVVLTRDPIKAILPKFQFLASKGASPSEIVLMTTKSPGFLLRSLNHIVSFYELVRRFSPSDLKSAAYLTRCQSLSDVRVAQNVKMLLDEGLTNANIHHLLRTRPSLLSSADLKKTVEEVKQLGFDPSQSYFSVVLLTKRVITKSQWDAKVDVLKKWGWSEQDFSEAYRRHPQFMLRSKDKLNAVMSFWISNLGWDSSALRIRPVLFGYSLEKRLIPRAKVIKYLLSNGLMKKNASIITPLYLTEELFLKKCVTCFEEKDRWKVAAKKLLSVGVSLQYGVWIQMKVQRF* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2380 397 PANTHER CGI-12 PROTEIN-RELATED 29 368 IPR003690 GO:0003690|GO:0006355
Ahy1g2380 397 Gene3D Transcription termination factor 3, mitochondrial 165 369 IPR038538 -
Ahy1g2380 397 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 29 368 - -
Ahy1g2380 397 Pfam mTERF 89 234 IPR003690 GO:0003690|GO:0006355
Ahy1g2380 397 Pfam mTERF 182 356 IPR003690 GO:0003690|GO:0006355
Ahy1g2380 397 SMART mt_12 305 339 IPR003690 GO:0003690|GO:0006355
Ahy1g2380 397 SMART mt_12 273 304 IPR003690 GO:0003690|GO:0006355
Ahy1g2380 397 SMART mt_12 206 234 IPR003690 GO:0003690|GO:0006355
Ahy1g2380 397 SMART mt_12 103 134 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2380 Ahy-Chr1 101889692 101891661 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Ahy1g2380 mTERF 2.20E-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2380 K15032 - gmx:102666739 317.39