Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2371 ATGCTTAGTCCTGAAGGAGAAATAAAAATAAGTTTTGGCTATCAGTGCAACAATATTGAAAGAGGTGGCATCCCTTGTGAGGTGGCCAATCGCCACAATATCCTTCCTGAAGTCCGTAGGACAAGCAGTTTCTCGTGCTTGTCAGGAGCGGCCTTAAGCGCAAACGCTACACTCGCCAACACAAACCTCTGCAATGGTAAGATAGGAGGTGAAATTCTTCCAAGTTGGGACTCTCCTAATTCATTTCGCAAGGTGCCCTCTTCACCAAGTCTTTCAAAGCTGGAAAGGCTATCATCTTCTCTGCCAAGTAGTTTATCTTACCTAAGTTGTAGTCCTTCCACCTCAAGTGATATACTAGAATATGACTCCTGCACATTCAAGTCCATGAGCGATCCTACCAGAACTGAAGGTTTTCTTAATGCTACCGAACTACAAGTGGCAGGAGGAGCTGCTGGTGAAGATAGAGTTCAAGCGGTATGTTCTGAAGAGAATGGATGGCTCTTTTGTGCAATTTATGATGGCTTTAATGGTAGAGATGCAGCTGACTTTCTGGCTGGTACACTCTATGATACCATCATATCTCACTTGAACAAGTTATTTTGGGAATTTGAGCCAGTTTCCATGGTAGAATCTGAAAATTTGATAAGTTTGGGTGGATCCCCTCAATATAACTTAGAGCAGAACCACAGCCTTATTTGTGAAGCAGACCGATCCCTTTCACACAGGGTACTTGATAGCCTCCAATGTGCTCTTACTCAAGCTGAGAATGATTTCTTGTACATGGTTGAGCAGGAAATGGAGGATCGTCCAGATTTAGTTTCAATTGGATCTTGTGTTTTAGTTGTGCTTCTTCATGGTAATGATTTGTATACACTTAATCTAGGTGACAGCAGAGCAGTATTGGCAACATGCAGTCGTGGCGATGGAATGCTCAAGGCTATCCAGCTTACTGATAGCCATACCGTCGACAATGAAGCCGAAAGAGCTACACTTGTAGCCAATCATCTTGATGATCCCAAGGTTGTTGTAGCAGGAAAGGTGAAAGGGAAGCTCAAGGTTACTCGCGCCTTTGGAGTCGGCTACTTGAAAAAAAGAAATCTCAATGATGCTTTGATGGGAATCCTTCGAGTGCGTGATCTAACAAGCCCTCCGTATATTTCCACTCAACCATCACTGAATGTCCATAAAATCTCGAATTCTGATCAATTTGTTGTGGTAGGGAGTGATGGTTTATTCGACTTCTTCAGCAACGTTGAGGCAGTAAAGCTTGTTGAGTCTTATATCTTGAGCAACCCTTTGGGCGATCCGGCAAAGTTTCTCATAGAAGAGCTTGTAGCTAGAGCAGCTCATTCTGCAGGTTTGACCATGGAAGAGTTGATGAATATTCCTGCTGGAAGAAGAAGGAAGTACCATGATGATGTGACTGTAATGGTGATCATGCTTGGGATGAATCAGAGGACTTCCAAGGCATCAACTTGCATCTAA 1485 0.4337 MLSPEGEIKISFGYQCNNIERGGIPCEVANRHNILPEVRRTSSFSCLSGAALSANATLANTNLCNGKIGGEILPSWDSPNSFRKVPSSPSLSKLERLSSSLPSSLSYLSCSPSTSSDILEYDSCTFKSMSDPTRTEGFLNATELQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYDTIISHLNKLFWEFEPVSMVESENLISLGGSPQYNLEQNHSLICEADRSLSHRVLDSLQCALTQAENDFLYMVEQEMEDRPDLVSIGSCVLVVLLHGNDLYTLNLGDSRAVLATCSRGDGMLKAIQLTDSHTVDNEAERATLVANHLDDPKVVVAGKVKGKLKVTRAFGVGYLKKRNLNDALMGILRVRDLTSPPYISTQPSLNVHKISNSDQFVVVGSDGLFDFFSNVEAVKLVESYILSNPLGDPAKFLIEELVARAAHSAGLTMEELMNIPAGRRRKYHDDVTVMVIMLGMNQRTSKASTCI* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2371 494 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 2 493 - -
Ahy1g2371 494 PANTHER PROTEIN PHOSPHATASE 2C 2 493 IPR015655 GO:0004722|GO:0006470
Ahy1g2371 494 SMART PP2C_4 129 479 IPR001932 -
Ahy1g2371 494 ProSiteProfiles PPM-type phosphatase domain profile. 138 481 IPR001932 -
Ahy1g2371 494 Pfam Protein phosphatase 2C 161 447 IPR001932 -
Ahy1g2371 494 SUPERFAMILY PP2C-like 152 482 IPR036457 -
Ahy1g2371 494 CDD PP2Cc 151 479 IPR001932 -
Ahy1g2371 494 Gene3D - 107 490 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2371 Ahy-Chr1 101755272 101758150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2371 4 494 PP2C-type Phosphatase Gene Family AT3G16560 65.191 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2371 - - adu:107464162 837.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2551 11 141464456 141467418 Ahy1g2371 1 101755272 101758150 hybridization
Ahy1g2371 1 101755272 101758150 Ahy14g1066 14 18775979 18779681 PCT
Ahy1g2371 1 101755272 101758150 Ahy4g0969 4 18817745 18821448 PCT
Ahy14g1066 14 18775979 18779681 Ahy1g2371 1 101755272 101758150 PCT
Ahy4g0969 4 18817745 18821448 Ahy1g2371 1 101755272 101758150 PCT