Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2333 ATGGTTCTTTTCCAATCGTTTGTGAATGAGTTGGCACGAAGTGTGTCCATCAAGAAAGAGAAGAAGTGTCAGAAAGATGATGATGGAAGAAGAGCTGTGAAAGAAATGGCAAAGGCAGCAAAGAAGAATGGTTTGTTATTGAAATCATGTGGAGTTGTAAAGTCCACAAAGGCCAACAGCTTTGCTTCTGTGTTCACAAATAAGGGCCAGAAAGGAGTCAATCAAGATCGTGTCCTTGTTTGGGAGGAATTTGGTTGCCAAGGGGACATGATGTTATGTGGAATTTTTGATGGACATGGCCTTTGGGGACACTTAGTAGCCAAGAGGGTGAGGAAACTAGTACCAGCTTTTCTGCTATGCAATTGGCAAAAAAGTGTGGCTGCAACATCATCACTTCACTTGGATTTTAAGATGGAATCAGATGAATATATTCATGGATTTGATTTGTGGAAGCAATCCTACTTAAAGTCTTATGCTGCCATTGATCAAGATCTAAAGCAGCACACTGGGATTGATTCCTTTCGAAGTGGTACTACAGCTTTGACAATTATCAAACAGGGAAATTATCTGATTACAGCAAATCTAGGTGATTCTAGAGCTGTGTTGGCAACAACTTCAGAGGATGGAAAATTGATTCCAATTCAGCTAACAACAGACTTGAAACCAAATTTACCAGAGGAAGCGAATCGCATAATGGAATCAGGAGGGGAAGTGTATTGTATGGAAGATGAAAAAGGAGTGTACAGAGCATGGATGCCTAATGGTAGATCACCAGGGTTTGCAATTTCAAGAGCTTTTGGTGACCATTGCATGAAGGACTTCGGATTAATATCTGTCCCAGAAGTCACACACACAAAACTCACCAAAAGGGATCAATTTGTAATATTGGCTTCAGATGGGGTATGGGATGTTATGTCAAATGAGGAAGCAGTGAAGATTGTGTATTCTTCAGGGGGAGAAAGAGCAGCAGAAAGGGTAGTGAAACGTGCAATCCATGAATGGAAACGCAAGAGAAGTAGCATTGCTATGGATGATATGTCTGTCATTTGCCTCTTCTTTCATTCTCACTCTCTCTCATCAGCTTCCTCCCACTAA 1095 0.411 MVLFQSFVNELARSVSIKKEKKCQKDDDGRRAVKEMAKAAKKNGLLLKSCGVVKSTKANSFASVFTNKGQKGVNQDRVLVWEEFGCQGDMMLCGIFDGHGLWGHLVAKRVRKLVPAFLLCNWQKSVAATSSLHLDFKMESDEYIHGFDLWKQSYLKSYAAIDQDLKQHTGIDSFRSGTTALTIIKQGNYLITANLGDSRAVLATTSEDGKLIPIQLTTDLKPNLPEEANRIMESGGEVYCMEDEKGVYRAWMPNGRSPGFAISRAFGDHCMKDFGLISVPEVTHTKLTKRDQFVILASDGVWDVMSNEEAVKIVYSSGGERAAERVVKRAIHEWKRKRSSIAMDDMSVICLFFHSHSLSSASSH* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2333 364 SMART PP2C_4 52 351 IPR001932 -
Ahy1g2333 364 Gene3D - 49 355 IPR036457 -
Ahy1g2333 364 PANTHER ALPHABET, ISOFORM E-RELATED 1 359 - -
Ahy1g2333 364 PANTHER PROTEIN PHOSPHATASE 2C 41-RELATED 1 359 - -
Ahy1g2333 364 ProSiteProfiles PPM-type phosphatase domain profile. 61 353 IPR001932 -
Ahy1g2333 364 SUPERFAMILY PP2C-like 56 354 IPR036457 -
Ahy1g2333 364 CDD PP2Cc 61 353 IPR001932 -
Ahy1g2333 364 Pfam Protein phosphatase 2C 138 331 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2333 Ahy-Chr1 101311008 101314179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2333 4 354 PP2C-type Phosphatase Gene Family AT3G05640 53.672 1.68e-141 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2333 - - gmx:100817397 552.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2594 11 142149381 142152248 Ahy1g2333 1 101311008 101314179 hybridization