Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2280 ATGGGAACGCCACCAACGGAAGAGCTTATGAAGAAGATCGAGCAGCTAGAGGAAGGTCACGAGCATCTCAAGCAAGAGATGTCAAGGCTCAAGCTTTCTGATGCCACCAGAAGCCACCACCACCATCGCCAGAGGTCTCACTCCGTCTCTCCCCAGCGTTCTAGATTGGGTGCACCGCCGAAGAGGGGACCCGCCGATGGAGCCTCAGCTGCCGCATGGAAGAGAGGCTCTTGTTCCTTTAAGCAATCTTCACCTCTGCAGAGAGAGAGTCGCAGTGATCCCAAAAAAGAAGGTGAAGGAGGTGGTGGTGCAAAGTGTGGTCCTTCCGCCGTGAATTTTACTGATAGACAGTATCTTAATATTTTGCAGTCAATGGGACAGTCCGTTCATATATTGGATCTTACCTCTCGGATAATCTACTGGAACCGGAGTGCCGAAAATCTGTATGGTTATGCTGCGGAGGAAGCTCTTGGGCAGGATGGGATTGAGCTGATTGTTGACCCCAGGGATTTTGCCTTGGCTGAAGATATTGTGAACCGTGTCGTAATGGGAGAGAGCTGGACTGGGCAATTCCCGGTCAAGAACAAGATGGGAGAGCAGTTCTTGGCGGTGGCGACGAATACTCCTTTCTATGATGATGATGGAAGTTTAGTTGGGATTATCTGTGTCTCGAGTGATTCGCGGCTCTTCGTTGAAACGAGAGTTCCGTGCTTGGGTGCAAACAATGCTGAATCAGGTTCAGGCTCTAGGCCTCTTAGAAGTAGCATTTCAAATAAACTTGGCCTTGATACTCAGCAGCCTCTCCAAACTTCTATAGCATCCAAGTTCTCAAATTTGGCATCAAAGGTAAGTAACAAAGTTAAGTCAAGAATCCGGACTGGAGAAAATAACGGTGATCGTGAAAGCGGGAGCGGAGGAAGTCATCAATCTGAGCATAGTTTCTCAGAAGTTGGTGTTGCAGACCACAGAGAGGATGCTAATTCCAGTGGAGCTAGCACACCCAGAGGTGATGTGATGCAGTCCCCTTTTGGTATATTTTCTCATGGTGAGGAAAGATCCCAAGGAAAAACTTTGAAAGAATATGCCGATGATAGTGAAGGAAAATCTATTCACAAGATTATAACGTCTAGGGCTGAAGCATGGATTCAAAAGAAAACAATGGCATGGCCATGGAAAGCAAATGATCAAGAAGGGTCGGAGGCAAAGGATGTCCGTGTTGCTGTGCCTTTCTTGTCAAATGATCATCAAGAAACTCAGAAGCAAGAACGTCAAGGAGGTGAAAGGAATCGCCCTAGTAACAATGAGGCTTCAGGATCCTGGTCGTCGTCAATCAATATTAACAGCACAAGTAGTGCCAGCAGCTGTGGAAGTGCCGGAAGTTGTGCTGTCAATAATAAAGTGGATGTGGACACCGATTGCTTGGATTATGAAATTTTGTGGGAAGACCTGACTATTGGAGAACAAATTGGACAAGGTTCCTGTGGAACTGTATATCATGCTCTGTGGTATGGATCAGATGTTGCGGTCAAGGTATTCTCAAAGCAAGAATATTCAGATGATGTGATACTTTCCTTCAGACAAGAGGTTTCTGTTATTAAAAGGCTTCGGCACCCAAATATTCTTCTCTTTATGGGGGCAGTGACTTCACCTCAACGTCTCTGCATTGTGACAGAGTTTCTCCCACGTGGAAGCTTGTGTCGCTTGTTACACAGAAACACGCCGAAACTTGACTGGAGACGACGAGTTCATATGGCCTTGGATATTGCACGAGGTGTGAATTATCTTCATCACTGCAATCCACCTATCATCCATAGAGATTTGAAGTCATCAAATCTTCTAGTTGATAAGAATTGGACTGTAAAGGTTTGTGACTTTGGTCTTTCACGTCTTAAGCATGAAACATTTCTCACTACTAAGACAGGGAGGGGCACGCCACAATGGATGGCACCAGAAGTTCTTCGTAACGAACCCTCAGATGAGAAGTCCGATGTATACAGCTTTGGAGTAATATTATGGGAACTTGCAACCGAAAAGATCCCTTGGGATAATCTCAACTCAATGCAGGTGATTGGAGCCGTGGGGTTCATGGATCAGCGACTTGAAATTCCAAAAGATGTTGATCCACGATGGGCTTCTATAATTGAGAGCTGCTGGCATCGTGATCCAGCTTCCCGTCCAACATTCCGGGAACTACTCGAGAAGCTTAGAGAGCTGCAAAGACGGTATGCCATTCAGTTCCAAGCTGCTCGATCGGCCGGAGGGGAAAGCCCCCAAAAGGAGTCCTAG 2286 0.4654 MGTPPTEELMKKIEQLEEGHEHLKQEMSRLKLSDATRSHHHHRQRSHSVSPQRSRLGAPPKRGPADGASAAAWKRGSCSFKQSSPLQRESRSDPKKEGEGGGGAKCGPSAVNFTDRQYLNILQSMGQSVHILDLTSRIIYWNRSAENLYGYAAEEALGQDGIELIVDPRDFALAEDIVNRVVMGESWTGQFPVKNKMGEQFLAVATNTPFYDDDGSLVGIICVSSDSRLFVETRVPCLGANNAESGSGSRPLRSSISNKLGLDTQQPLQTSIASKFSNLASKVSNKVKSRIRTGENNGDRESGSGGSHQSEHSFSEVGVADHREDANSSGASTPRGDVMQSPFGIFSHGEERSQGKTLKEYADDSEGKSIHKIITSRAEAWIQKKTMAWPWKANDQEGSEAKDVRVAVPFLSNDHQETQKQERQGGERNRPSNNEASGSWSSSININSTSSASSCGSAGSCAVNNKVDVDTDCLDYEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSDDVILSFRQEVSVIKRLRHPNILLFMGAVTSPQRLCIVTEFLPRGSLCRLLHRNTPKLDWRRRVHMALDIARGVNYLHHCNPPIIHRDLKSSNLLVDKNWTVKVCDFGLSRLKHETFLTTKTGRGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELATEKIPWDNLNSMQVIGAVGFMDQRLEIPKDVDPRWASIIESCWHRDPASRPTFRELLEKLRELQRRYAIQFQAARSAGGESPQKES* 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2280 761 Gene3D Transferase(Phosphotransferase) domain 1 562 747 - -
Ahy1g2280 761 SUPERFAMILY PYP-like sensor domain (PAS domain) 120 223 IPR035965 -
Ahy1g2280 761 PANTHER SERINE/THREONINE-PROTEIN KINASE DDB_G0282963 ISOFORM X1-RELATED 30 759 - -
Ahy1g2280 761 ProSiteProfiles Protein kinase domain profile. 483 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g2280 761 MobiDBLite consensus disorder prediction 321 340 - -
Ahy1g2280 761 MobiDBLite consensus disorder prediction 15 109 - -
Ahy1g2280 761 ProSitePatterns Serine/Threonine protein kinases active-site signature. 602 614 IPR008271 GO:0004672|GO:0006468
Ahy1g2280 761 CDD PAS 125 226 IPR000014 -
Ahy1g2280 761 MobiDBLite consensus disorder prediction 287 316 - -
Ahy1g2280 761 Gene3D PAS domain 126 229 - -
Ahy1g2280 761 MobiDBLite consensus disorder prediction 15 34 - -
Ahy1g2280 761 MobiDBLite consensus disorder prediction 409 445 - -
Ahy1g2280 761 SMART serkin_6 483 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g2280 761 TIGRFAM sensory_box: PAS domain S-box protein 116 226 IPR000014 -
Ahy1g2280 761 Gene3D Phosphorylase Kinase; domain 1 476 560 - -
Ahy1g2280 761 PRINTS Tyrosine kinase catalytic domain signature 596 614 IPR001245 GO:0004672|GO:0006468
Ahy1g2280 761 PRINTS Tyrosine kinase catalytic domain signature 662 684 IPR001245 GO:0004672|GO:0006468
Ahy1g2280 761 PRINTS Tyrosine kinase catalytic domain signature 706 728 IPR001245 GO:0004672|GO:0006468
Ahy1g2280 761 PRINTS Tyrosine kinase catalytic domain signature 557 570 IPR001245 GO:0004672|GO:0006468
Ahy1g2280 761 PRINTS Tyrosine kinase catalytic domain signature 643 653 IPR001245 GO:0004672|GO:0006468
Ahy1g2280 761 CDD STKc_MAP3K-like 489 735 - -
Ahy1g2280 761 SMART pas_2 116 183 IPR000014 -
Ahy1g2280 761 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 30 759 - -
Ahy1g2280 761 MobiDBLite consensus disorder prediction 298 314 - -
Ahy1g2280 761 Pfam PAS fold 117 224 IPR013767 GO:0006355
Ahy1g2280 761 SUPERFAMILY Protein kinase-like (PK-like) 472 734 IPR011009 -
Ahy1g2280 761 MobiDBLite consensus disorder prediction 430 445 - -
Ahy1g2280 761 MobiDBLite consensus disorder prediction 35 49 - -
Ahy1g2280 761 ProSiteProfiles PAS repeat profile. 114 185 IPR000014 -
Ahy1g2280 761 Coils Coil 6 33 - -
Ahy1g2280 761 Pfam Protein tyrosine and serine/threonine kinase 483 735 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2280 Ahy-Chr1 100756544 100761605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2280 1 752 MAP Kinase Kinase Kinase AT3G06620 60.128 0.0 937
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Ahy1g2280 PK_Tyr_Ser-Thr 2.00E-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2280 - - pvu:PHAVU_003G114400g 1161.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2656 11 142776265 142780632 Ahy1g2280 1 100756544 100761605 hybridization
Ahy1g2280 1 100756544 100761605 Ahy14g0916 14 14775080 14781661 PCT
Ahy1g2280 1 100756544 100761605 Ahy4g0828 4 12984513 12991469 PCT
Ahy14g0916 14 14775080 14781661 Ahy1g2280 1 100756544 100761605 PCT
Ahy4g0828 4 12984513 12991469 Ahy1g2280 1 100756544 100761605 PCT