Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2274 ATGAGCCCCCTTCGTGTTCCTCTACCACCCAACACACCCCACCACTACCTCCAGCTAACGTGCGCCCTCTTCCTTACCCTACGCACCCCCCTTCTTTCCTTTCCATTTCCGTTATTCTCTCTCTCTCTCTCTCACACACACAACATTTGTTTTTATCTTCTCACTTTCATAAACCTCCGCGTTAACCGTTCTCCCCCACCTCCTTTCTCTCGCTCTCTCTCTCATTCCCATCCAGATTCGGAGGTTCGGAACGACACCAAGCTTGCTTCGGGTGCCGCCGGTGGTGGTTTTAGGGTTAGGGTTTCCGAGAGATGTGGTATGCTTCAGGCATTCATGAATCTACGCGCTCTCTGTTTGAGGCCATTCGGGCTCGCTGACGACAAGGTCGACACTTCCCCCGTCGAAGTCAACGGCGGCAGCTTCAGAGGCAGCGGAAGCTTCAAAGGCGGCGGCGGCGCAAGAGAAGGCAAGGACAGCCTCCTCTGGTCTCGCGACGTCGGAAAATATGGCTCCGGCGATTTCTCCATGGCCGTCGTCCAGGCCAATCAGGTCCTTGAAGACCAGAGCCAGATAGAGTCCGGTCCCCTTGGCACCTTTGTTGGCATCTACGACGGTCACGGAGGACCCGACGCCGCGCGATTCGTATGCGATCACCTCTTTCGCCATTTTCAAGCAATATCAGCTGAAGCAAATGGAGGCGTGATCACTGAGACCATCGAGAGGGCATTCCGCCAAACAGAAGAAGGGTATGCTGCTCTTGTGTCAGACTTGTGGAGCACTCGGCCTCAAGTCGCAAGCGCCGGGACTTGTTGTCTGGTTGGAGTGATATTTCAGCAGACACTCTTTGTGGCAAACCTTGGAGACTCCCGCGTTGTATTGGGCAAGAAAGTTGGCAACACAGGAGGCGTTGCTGCAATTCAGCTTTCTACAGAACACAATGCAAATGTTGAAGCTGTGCGGCAGGAGCTTAAAGAGTTACACCCACATGATCCCCAGATTGTTGTCCTCAAACATGGAGTGTGGAGAGTCAAAGGCATTATTCAGATTTCTAGATCTATAGGTGACGTATATATGAAAGACGCACAATTTAACCGGGAACCACTTCCTGCAAAATTCAGACTTCCTGAACCCATGCACATGCCTATCTTGAGTGCTGAACCCGCTATTATTTCTCATCGACTGCAACCAAATGATTCTTTCATTATATTTGCATCAGATGGCTTATGGGAGCACCTGAGCAATGAAAAGGCTGTGGAAATTGTTAGCAGCAATCCACACACGGGTAGTGCCAAGAAACTTGTCAAGGCTGCCCTACACGAAGCAGCAAGAAAACGAGAGATGCGATATTCAGACCTGCGCAAGATAGACAAGAAGGTCCGACGCCATTTTCATGATGATATATCTGTTATTGTTTTATTCTTGAACCACGATCTTATATCCAAAGGCACAGTGCTAGACCCACCACTCTCACTTCGAAGCGCACTCGATCACTGA 1494 0.506 MSPLRVPLPPNTPHHYLQLTCALFLTLRTPLLSFPFPLFSLSLSHTHNICFYLLTFINLRVNRSPPPPFSRSLSHSHPDSEVRNDTKLASGAAGGGFRVRVSERCGMLQAFMNLRALCLRPFGLADDKVDTSPVEVNGGSFRGSGSFKGGGGAREGKDSLLWSRDVGKYGSGDFSMAVVQANQVLEDQSQIESGPLGTFVGIYDGHGGPDAARFVCDHLFRHFQAISAEANGGVITETIERAFRQTEEGYAALVSDLWSTRPQVASAGTCCLVGVIFQQTLFVANLGDSRVVLGKKVGNTGGVAAIQLSTEHNANVEAVRQELKELHPHDPQIVVLKHGVWRVKGIIQISRSIGDVYMKDAQFNREPLPAKFRLPEPMHMPILSAEPAIISHRLQPNDSFIIFASDGLWEHLSNEKAVEIVSSNPHTGSAKKLVKAALHEAARKREMRYSDLRKIDKKVRRHFHDDISVIVLFLNHDLISKGTVLDPPLSLRSALDH* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2274 497 ProSitePatterns PPM-type phosphatase domain signature. 199 207 IPR000222 GO:0043169
Ahy1g2274 497 ProSiteProfiles PPM-type phosphatase domain profile. 173 474 IPR001932 -
Ahy1g2274 497 PANTHER PROTEIN PHOSPHATASE 2C 42-RELATED 110 497 - -
Ahy1g2274 497 MobiDBLite consensus disorder prediction 67 88 - -
Ahy1g2274 497 Gene3D - 162 483 IPR036457 -
Ahy1g2274 497 SUPERFAMILY PP2C-like 183 475 IPR036457 -
Ahy1g2274 497 CDD PP2Cc 174 474 IPR001932 -
Ahy1g2274 497 SMART PP2C_4 160 472 IPR001932 -
Ahy1g2274 497 PANTHER ALPHABET, ISOFORM E-RELATED 110 497 - -
Ahy1g2274 497 Pfam Protein phosphatase 2C 197 444 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2274 Ahy-Chr1 100695953 100700201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2274 107 494 PP2C-type Phosphatase Gene Family AT4G38520 55.668 5.95e-151 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2274 K01102 - gmx:100790813 644.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2662 11 142875452 142879730 Ahy1g2274 1 100695953 100700201 hybridization
Ahy1g2274 1 100695953 100700201 Ahy14g0907 14 14628589 14632661 PCT
Ahy1g2274 1 100695953 100700201 Ahy4g0822 4 12873128 12877148 PCT
Ahy14g0907 14 14628589 14632661 Ahy1g2274 1 100695953 100700201 PCT
Ahy4g0822 4 12873128 12877148 Ahy1g2274 1 100695953 100700201 PCT