Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2271 ATGGATCCAGGGAATCCCGCTTCAACGCCGGAACCTGAATCACCGACCTCTCCCTCCGCCGGTTTCAACACCGACCAGCTTCCACACACCAGCCATGTTTCCGAAGACGACGAGGCTTCCGTTGACCCCGACATCATTCAGGATGAGCCTGAAGACGAAAACCCGGAAGAGGACGAAGATGGAGAGGATCTATACAACGACAACTACATGGATGATTATCGGAGGTTGGATGACCACGATCAGTTTGAGTCGGCTGGGCTGGATGATTCAGTGGAGGATGTTAGGGATTTTGATCAGATAATGGAAGATCGAAGGGCTGCAGAGGTGGAACTAGATGCTCGTGATGGTCGCCTTAACAATCGCAAGTTCCCTCAGCTTCTCCATGACCAAGATACTGATGATGACAGTTACAGGCCCTCCAAAAGGGCTCGAGCTGATGCCAGGGCTCCTAATCTGAGCGATGATGATTTCGATGGGTTGCATAGTTCACCTGGAAGGTCACAGCCAGGACACTCTAGAGATGATGTTCCGAGGACTGATCAAACCGAGGATGATCAATATGATGATGACTTTGATGAGGAAGGTGGTTATGAGATGTACCGCGTTCAAGGAACACTTAGAGAATGGGTTACAAGAGATGAAGTCCGCCGCTTCATAGCTAGAAAATTCAAGGATTTCTTGCTCACGTATGTTAATCCTAAAAATGAACACGGTGACTTTGAATATGTGCGGCTGATAAATGAGATGGTGTTAGCCAATAAGTGTAGTTTGGAGATAGATTACAAACAATTTATCTACGTCCATCCCAACATTGCCATTTGGCTGGCTGATGCACCTCAGTCTGTCTTGGAAGTAATGGAAGATGTTGCTAAAAATGTTGTCTTTCAGTTGCATCCAAATTACAAAAATATACAACAAAAGATTTATGTTCGTATAACAAACTTACCAGTTTATGACCAGATTCGGAATATAAGACAAATTCACTTGAATACAATGATTCGAATTGGGGGAGTTGTAACTAGACGTTCAGGAGTCTTTCCCCAGTTGCAACAGGTGAAGTATGACTGTAATAAATGTGGTGCAACTTTGGGACCTTTTTTCCAGAATTCCTACTCAGAGGTGAGAGTTGGATCCTGTCCTGAGTGTCAATCAAAAGGGCCATTTACTGTCAATATTGAGCAGACAATTTACAGGAATTTTCAGAAGCTCACTCTCCAAGAGAGCCCAGGAATTGTTCCTGCAGGTCGTTTACCAAGATACAAGGAAGTTATACTATTGAACGATCTGATTGACTGTGCCCGTCCTGGGGAAGAGATTGAGGTCACAGGTATCTATACTAATAACTTCGATTTGTCGCTAAACACAAAGAATGGTTTTCCTGTGTTTGCCACTGTTGTCGAAGCAAATTATGTCACAAAGAAGCACGATCTGTTCTCTGCTTACAAACTTACTCAGGAAGACAAAGAAGAGATTGAGAATTTGAGCAAAGATCCAAGAATAGGAGAAAGGATTATCAAGTCTATTGCTCCATCAATCTATGGTCATGAAGACATCAAAACTGCAATAGCTTTAGCTATGTTTGGAGGTCAAGAAAAAAATGTTCAAGGAAAGCACAGACTGAGAGGAGATATTAATGTTCTACTTCTTGGTGATCCAGGAACAGCGAAGTCGCAATTTCTCAAATACGTTGAGAAAACTGGGCAACGAGCTGTATACACCACCGGCAAGGGGGCGTCTGCTGTGGGTCTCACTGCAGCAGTTCACAAGGATCCTGTCACGAGGGAGTGGACCTTGGAAGGGGGAGCCCTTGTCCTAGCTGACAAAGGGATCTGCCTTATCGATGAGTTTGACAAGATGAATGACCAAGACAGGGTAAGTATCCATGAAGCCATGGAGCAGCAGAGTATAAGCATATCAAAAGCGGGAATTGTTACATCTCTTCAGGCACGCTGTTCTGTCATTGCTGCTGCCAATCCTATTGGAGGAAGATATGATTCCTCCAAAACATTTTCTCAAAATGTTGAATTGACAGACCCTATTATTTCCCGTTTTGACATCCTCTGTGTTGTGAAGGATGTGGTTGATCCGGTCACTGATGAAATGCTTGCAAAGTTTGTAGTGGACAGTCACTTTAGGTCACAACCAAAGGGTGGTAACAGAGACGAAAAGTCAGTAACTGAGTCCCAAGATGATTATGCGTCTGCCATGCCTGTTGATCCTGAGATACTTCCACAAGAGTTGCTAAAGAAGTATATTACTTATGCTAAATTAAATGTATTTCCAAGACTACATGATGCTGATTTGGATAAGTTGACACATGTTTATGCCGAACTGCGGAAAGAATCCTCGCATGGTCAAGGGGTCCCTATTGCTGTAAGGCATATTGAGTCAATGATAAGGATGTCCGAAGCTCATGCGAGGATGCATCTCAGGCACCATGTCACACAAGAGGATGTGGACATGGCAATTCGAGTCCTACTTGATTCATTCATTTCAACCCAGAAATTTGGAGTGCAGAAAGCTCTTCAAAAGAGCTTTAGAAAATATATGACTTTCAAGAAGGACTACAATGAATTGCTGCTTTACCTTCTCCGCGAGCTTGTCAAGAATGCTTTGCGTTTTGAAGAAATCATTGCTGGATCTACTTCAGGTCTTGAACATATAGATGTCAAAGTGGAAGATCTCCACAATAAGGCTCAAGAGCACGAAATATATGATCTTAAACCATTCTTCAACAGTAGTCACTTTTCAAGGGCCAATTTTGTATTGGATGAAGAGCGCGGAATAATCAGACATCGCCTTGCTAATTGA 2811 0.4326 MDPGNPASTPEPESPTSPSAGFNTDQLPHTSHVSEDDEASVDPDIIQDEPEDENPEEDEDGEDLYNDNYMDDYRRLDDHDQFESAGLDDSVEDVRDFDQIMEDRRAAEVELDARDGRLNNRKFPQLLHDQDTDDDSYRPSKRARADARAPNLSDDDFDGLHSSPGRSQPGHSRDDVPRTDQTEDDQYDDDFDEEGGYEMYRVQGTLREWVTRDEVRRFIARKFKDFLLTYVNPKNEHGDFEYVRLINEMVLANKCSLEIDYKQFIYVHPNIAIWLADAPQSVLEVMEDVAKNVVFQLHPNYKNIQQKIYVRITNLPVYDQIRNIRQIHLNTMIRIGGVVTRRSGVFPQLQQVKYDCNKCGATLGPFFQNSYSEVRVGSCPECQSKGPFTVNIEQTIYRNFQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVTGIYTNNFDLSLNTKNGFPVFATVVEANYVTKKHDLFSAYKLTQEDKEEIENLSKDPRIGERIIKSIAPSIYGHEDIKTAIALAMFGGQEKNVQGKHRLRGDINVLLLGDPGTAKSQFLKYVEKTGQRAVYTTGKGASAVGLTAAVHKDPVTREWTLEGGALVLADKGICLIDEFDKMNDQDRVSIHEAMEQQSISISKAGIVTSLQARCSVIAAANPIGGRYDSSKTFSQNVELTDPIISRFDILCVVKDVVDPVTDEMLAKFVVDSHFRSQPKGGNRDEKSVTESQDDYASAMPVDPEILPQELLKKYITYAKLNVFPRLHDADLDKLTHVYAELRKESSHGQGVPIAVRHIESMIRMSEAHARMHLRHHVTQEDVDMAIRVLLDSFISTQKFGVQKALQKSFRKYMTFKKDYNELLLYLLRELVKNALRFEEIIAGSTSGLEHIDVKVEDLHNKAQEHEIYDLKPFFNSSHFSRANFVLDEERGIIRHRLAN* 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2271 936 Pfam MCM OB domain 320 447 IPR033762 -
Ahy1g2271 936 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 510 833 IPR027417 -
Ahy1g2271 936 Gene3D - 321 446 IPR012340 -
Ahy1g2271 936 Pfam MCM AAA-lid domain 746 830 IPR041562 -
Ahy1g2271 936 Pfam Mini-chromosome maintenance protein 2 36 192 IPR008045 GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775
Ahy1g2271 936 CDD MCM2 503 829 - -
Ahy1g2271 936 MobiDBLite consensus disorder prediction 109 161 - -
Ahy1g2271 936 Gene3D - 480 853 IPR027417 -
Ahy1g2271 936 SUPERFAMILY Nucleic acid-binding proteins 222 469 IPR012340 -
Ahy1g2271 936 MobiDBLite consensus disorder prediction 67 94 - -
Ahy1g2271 936 MobiDBLite consensus disorder prediction 14 29 - -
Ahy1g2271 936 MobiDBLite consensus disorder prediction 40 66 - -
Ahy1g2271 936 MobiDBLite consensus disorder prediction 1 94 - -
Ahy1g2271 936 Pfam MCM P-loop domain 488 710 IPR001208 GO:0003677|GO:0005524|GO:0032508
Ahy1g2271 936 Pfam MCM N-terminal domain 221 314 IPR027925 -
Ahy1g2271 936 Gene3D - 348 398 - -
Ahy1g2271 936 ProSitePatterns MCM family signature. 609 617 IPR018525 GO:0003677|GO:0005524|GO:0006260
Ahy1g2271 936 Gene3D - 213 317 - -
Ahy1g2271 936 MobiDBLite consensus disorder prediction 714 728 - -
Ahy1g2271 936 PRINTS Mini-chromosome maintenance (MCM) protein 2 signature 330 347 IPR008045 GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775
Ahy1g2271 936 PRINTS Mini-chromosome maintenance (MCM) protein 2 signature 464 475 IPR008045 GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775
Ahy1g2271 936 PRINTS Mini-chromosome maintenance (MCM) protein 2 signature 449 460 IPR008045 GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775
Ahy1g2271 936 PRINTS Mini-chromosome maintenance (MCM) protein 2 signature 353 365 IPR008045 GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775
Ahy1g2271 936 PRINTS Mini-chromosome maintenance (MCM) protein 2 signature 388 402 IPR008045 GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775
Ahy1g2271 936 ProSiteProfiles MCM family domain profile. 500 706 IPR001208 GO:0003677|GO:0005524|GO:0032508
Ahy1g2271 936 PRINTS Mini-chromosome maintenance (MCM) protein family signature 629 642 IPR001208 GO:0003677|GO:0005524|GO:0032508
Ahy1g2271 936 PRINTS Mini-chromosome maintenance (MCM) protein family signature 680 688 IPR001208 GO:0003677|GO:0005524|GO:0032508
Ahy1g2271 936 PRINTS Mini-chromosome maintenance (MCM) protein family signature 653 665 IPR001208 GO:0003677|GO:0005524|GO:0032508
Ahy1g2271 936 PRINTS Mini-chromosome maintenance (MCM) protein family signature 541 556 IPR001208 GO:0003677|GO:0005524|GO:0032508
Ahy1g2271 936 PRINTS Mini-chromosome maintenance (MCM) protein family signature 601 615 IPR001208 GO:0003677|GO:0005524|GO:0032508
Ahy1g2271 936 MobiDBLite consensus disorder prediction 713 733 - -
Ahy1g2271 936 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 137 930 IPR031327 GO:0003677|GO:0005524|GO:0032508
Ahy1g2271 936 PANTHER DNA HELICASE 137 930 - -
Ahy1g2271 936 MobiDBLite consensus disorder prediction 109 194 - -
Ahy1g2271 936 SMART mcm 317 831 IPR031327 GO:0003677|GO:0005524|GO:0032508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2271 Ahy-Chr1 100629171 100634526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2271 21 931 Core DNA Replication Machinery Family AT1G44900 76.906 0.0 1387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2271 K02540 - gmx:100799441 1595.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2667 11 142922743 142928077 Ahy1g2271 1 100629171 100634526 hybridization