Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2265 ATGGAAGAAGGGAAGAGAGAGAAGAAGAAGAAAGAAGAAGAAGCATCCACCACCACTGCTACTACTATTACTATGGCTAATTCCGTCGCATTTTCCGATGAGATTCCGATCACAAACACAAACACAATCAACACTTCTTACCCTTTCTCAAGCATCTTTGACATGATGCCACTTCCATTACTACCCTCTTCTGATCACAAAACTTCTGCCAATGGCTTCATCGACTTGCTCGCTCTCCATGACTACACTCCTTCCTTATTCGATTGGCTTCCCACAACCACCACCTCCGCCGAAGCCACGCCGCAGCAAATCAGCAGCAGCCAGCAGCAGCAGCAGGCTCTGCCGTCGCCGGCGAGCTCCAATGTCCCGGACTGTTCGGAGGTGTTGAACACTCCGGCGTCACCAAACTCGTCGTCGATTTCATCTTCGTCGAACGAAGGCGGCGCCGGCGTCGGCAGCAACAACAACAACGCGGAAGAGCATAACGGTGGGAAAGTAGCTGCGGATGATGAACATGAAGCAGAGGATGAAGAGGCCGATGGATCCAAAGAGAATCAAGACAAGACTAAGAAACAATTGAAAGCAAAGAAGAAGAATCAAAAGAAGCAAAGAGAACCTCGGTTTGCGTTTATGACAAAGAGCGAAGTGGATCATTTAGACGACGGTTACAGATGGCGTAAGTACGGACAGAAAGCAGTGAAAAATAGCCCTTATCCAAGGAGCTACTATCGTTGCACCACATCCGGGTGTGGTGTTAAGAAGCGCGTGGAGCGTTCTTCCGACGATCCAAGCATTGTTGTAACTACCTATGAAGGGCAGCACACTCACCCTTGTCCCGCTACCTCACGCGCCGCACTCGCGTTCATGCACGAACCCTCCTTCGCCACCATTGGATCTTCTTCTCCTCACTTTCTGCTTCCTCATCAACAACACTTCCAGCAACCGCCGCCACCGCCTTCGTTATATAACTCCGCTACTACTACTAATCCAACTCCACCTACTAATGCGTCGTCGTTTGGGACCTTCGTTCTTCAGGATGGAGCTTTTGCTGCAGCTTCTAGGTTGAACATGGATCAAGCTTTCTTGAGAGACCATGGTCTTCTTCAGGACATTGTTCCATCTCAGATCAGGAAGGAGGATAACATCGAATGA 1152 0.4957 MEEGKREKKKKEEEASTTTATTITMANSVAFSDEIPITNTNTINTSYPFSSIFDMMPLPLLPSSDHKTSANGFIDLLALHDYTPSLFDWLPTTTTSAEATPQQISSSQQQQQALPSPASSNVPDCSEVLNTPASPNSSSISSSSNEGGAGVGSNNNNAEEHNGGKVAADDEHEAEDEEADGSKENQDKTKKQLKAKKKNQKKQREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTSGCGVKKRVERSSDDPSIVVTTYEGQHTHPCPATSRAALAFMHEPSFATIGSSSPHFLLPHQQHFQQPPPPPSLYNSATTTNPTPPTNASSFGTFVLQDGAFAAASRLNMDQAFLRDHGLLQDIVPSQIRKEDNIE* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2265 383 Pfam WRKY DNA -binding domain 220 277 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy1g2265 383 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 70 374 - -
Ahy1g2265 383 SMART WRKY_cls 219 278 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy1g2265 383 Gene3D WRKY domain 203 280 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy1g2265 383 SUPERFAMILY WRKY DNA-binding domain 211 279 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy1g2265 383 MobiDBLite consensus disorder prediction 307 339 - -
Ahy1g2265 383 ProSiteProfiles WRKY domain profile. 214 279 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy1g2265 383 MobiDBLite consensus disorder prediction 97 205 - -
Ahy1g2265 383 Coils Coil 183 203 - -
Ahy1g2265 383 MobiDBLite consensus disorder prediction 324 339 - -
Ahy1g2265 383 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 70 374 IPR044810 GO:0003700
Ahy1g2265 383 MobiDBLite consensus disorder prediction 97 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2265 Ahy-Chr1 100522194 100524172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2265 25 379 WRKY Transcription Factor Family AT5G49520 44.737 1.33e-59 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy1g2265 WRKY 2.30E-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2265 - - gmx:100808190 306.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2672 11 143063671 143065638 Ahy1g2265 1 100522194 100524172 hybridization