Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2242 ATGTTGGGGTCAAAGAAGATTTTCATTCTGGCTATAGATATGAATATTCTTCTGTGTTTCATTCTTTCATTAACTACTACTATTACTACATCTTTCATTAAAGAAGCAGCATCATCATCATCAGAATTTAATGTGAAAAGCTATGAAGCTGATAGAGTAAGAGATCTTCCTGGCCAACCTTCAAGCCCATTGGTCTCACACTTTTCAGGATATATCACTGTCAATCAAGAACATGGGAGGGCCCTTTTTTACTGGTTCTTTGAAGCTCAATCTGATCCTTCCAACAAGCCTCTCCTTCTATGGCTCAATGGAGGACCTGGATGCTCCTCAATTGGGTATGGTGCTGTAGTTGAGATAGGACCTCTTTTGGTCAACAAAAATGGTGAAGGACTACAATTCAACCCATATTCATGGAATCAAGAAGCAAATTTATTATTTGTGGAGTCCCCTGTTGGAGTTGGTTTCTCTTACACCAACACATCCTCTGACCTCACTATACTAGAGGATAGCTTTGTTGCTGAGGATGCCTACAATTTCTTGGTAAATTGGCTACAAAGATTCCCTCAGTTCAAATCAAGGGACTTCTTTATATCAGGAGAAAGCTATGCTGGCCATTATGTCCCTCAACTTGCAGAGCTAGTATTTGATCGAAATAAGGATAGAAACAAGTACCCTTTTATTAATCTTAAAGGTTTTATTGTGGGGAATCCAGAAACTGATGATTACTATGACAACAAAGGCCTTCTAGAATATGCATGGAGCCATGCAGTTATATCAGATGAACAATATGAGAAAGCAAAGAAAGTATGTGATTTCAAACAAATTGATTGGCCTAAGGAATGCAATGAGGCCATGAACACAGTGTGGCAAGATTACTCAGAAATTGACATATACAACATTTATGCCCCTAAATGTACTCTAAATAGCAGCACTTCCTCATTATTATTAGATGATGATGATGAAATTGAGACCAAGAGAATGAGAATTTTTGGTGGCTATGATCCTTGTTATTCCACATATGCAGCACAATATTTCAATAAGATAGATGTTCAATCATCTTTTCATGCTAATATTAGAGGAGAAAACACAAACACTACTAGTGTAACATGGAAGGTTTGCAATGATTCCATATTGAGGACTTACAACTTCTCTGTATTTTCGATCCTACCCATCTACACCAAACTCATAAAGGGTGGGCTTAAGATATGGGTTTACAGTGGAGATGCAGATGGAAGAGTACCTGTGATAGGTACACGGTACTGCATTGAGGCCCTTAATTTACCTCTAAAGACTACTTGGCGTACTTGGTACCATCAAAATCAGGTGGGAGGAAGAATAGTGGAGTATGAAGGGGTGACATATGTGACAGTGAGAGGGGCAGGTCACTTGGTGCCTCTAAACAAACCCAATGAAGCTCTCTCCCTCATTCATTCCTTTCTAACAGGGGACCACCTTCCTACGCGCTAA 1467 0.3926 MLGSKKIFILAIDMNILLCFILSLTTTITTSFIKEAASSSSEFNVKSYEADRVRDLPGQPSSPLVSHFSGYITVNQEHGRALFYWFFEAQSDPSNKPLLLWLNGGPGCSSIGYGAVVEIGPLLVNKNGEGLQFNPYSWNQEANLLFVESPVGVGFSYTNTSSDLTILEDSFVAEDAYNFLVNWLQRFPQFKSRDFFISGESYAGHYVPQLAELVFDRNKDRNKYPFINLKGFIVGNPETDDYYDNKGLLEYAWSHAVISDEQYEKAKKVCDFKQIDWPKECNEAMNTVWQDYSEIDIYNIYAPKCTLNSSTSSLLLDDDDEIETKRMRIFGGYDPCYSTYAAQYFNKIDVQSSFHANIRGENTNTTSVTWKVCNDSILRTYNFSVFSILPIYTKLIKGGLKIWVYSGDADGRVPVIGTRYCIEALNLPLKTTWRTWYHQNQVGGRIVEYEGVTYVTVRGAGHLVPLNKPNEALSLIHSFLTGDHLPTR* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2242 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 147 157 IPR001563 GO:0004185|GO:0006508
Ahy1g2242 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 452 465 IPR001563 GO:0004185|GO:0006508
Ahy1g2242 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 183 208 IPR001563 GO:0004185|GO:0006508
Ahy1g2242 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 134 146 IPR001563 GO:0004185|GO:0006508
Ahy1g2242 488 Pfam Serine carboxypeptidase 57 481 IPR001563 GO:0004185|GO:0006508
Ahy1g2242 488 Gene3D - 336 377 - -
Ahy1g2242 488 ProSitePatterns Serine carboxypeptidases, serine active site. 197 204 IPR018202 GO:0004185
Ahy1g2242 488 Coils Coil 487 488 - -
Ahy1g2242 488 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 39 487 IPR001563 GO:0004185|GO:0006508
Ahy1g2242 488 SUPERFAMILY alpha/beta-Hydrolases 53 483 IPR029058 -
Ahy1g2242 488 Gene3D alpha/beta hydrolase 47 307 IPR029058 -
Ahy1g2242 488 ProSitePatterns Serine carboxypeptidases, histidine active site. 452 469 IPR033124 GO:0004185
Ahy1g2242 488 Gene3D - 388 482 - -
Ahy1g2242 488 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 26 39 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2242 Ahy-Chr1 100307208 100311977 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2242 370 485 Calmodulin-binding Proteins AT2G22960 32.479 1.15e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2242 K16297 - gmx:100815141 772.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2703 11 143575904 143582203 Ahy1g2242 1 100307208 100311977 hybridization