Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2198 ATGTTTCATGGCAGGTTATGGATGTTTTCGCTTTCTTCCTTATCAGAAGCAGAGAAGGTTCTAGGAGAAATATCTAATTATAAAGTTCAGGCAGGTTGCAAGTTTCTTATATTTGCGCACCATCAGCCAATGATAGATGCGATACATAAGTGCCTTCTTAAGAAAAAAGTGGGTTGCATCTGGATTGATGGAGGTACACCCGCTGCATCAAGGCAACAATTGGTTACAGATTTCCAGGAAAAGGATTATATCAAGGCAGCTGTACTATCCATTAAAGCGGGAGGAGTTGGATTAACTTTAACTGCTGCAAGCACAGTTATCTTTACAGAACAATCCTGGACTCCAGGTGACCTAATTCAGGCCAAAGATCGTGCATATAGAATTGGTCAGTCTTTCGCCGCTTGGTATAGCATTGACTTAACATTTATTATGCATTGA 438 0.4041 MFHGRLWMFSLSSLSEAEKVLGEISNYKVQAGCKFLIFAHHQPMIDAIHKCLLKKKVGCIWIDGGTPAASRQQLVTDFQEKDYIKAAVLSIKAGGVGLTLTAASTVIFTEQSWTPGDLIQAKDRAYRIGQSFAAWYSIDLTFIMH* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2198 145 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 12 131 - -
Ahy1g2198 145 Gene3D - 8 134 IPR027417 -
Ahy1g2198 145 SMART helicmild6 46 129 IPR001650 -
Ahy1g2198 145 CDD SF2_C_SNF 19 130 - -
Ahy1g2198 145 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY A-LIKE PROTEIN 1 12 131 IPR030101 GO:0006281|GO:0031297|GO:0036310
Ahy1g2198 145 Pfam Helicase conserved C-terminal domain 28 129 IPR001650 -
Ahy1g2198 145 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 16 145 IPR001650 -
Ahy1g2198 145 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 133 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2198 Ahy-Chr1 99375925 99379434 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2198 32 130 RAD5 or RAD16-like Gene Family AT1G02670 34.343 5.03e-14 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2198 K14440 - ahf:112723272 267.7