Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2194 ATGTCCATAAAGGAGGATGATGTTAAGAATGATTCTGATAATGATTTGGGTGATGATTTCGATTATCAACTGAATGCAGAAGATGATGCTGATGACGACGACGATGTGGATTCGCTGGATTCCACTAGCAAGAGTGAAGAAGTTTGTGGTGTAAAAAGAATAGCGGATTTAATGGTGGAGGATATTTGGAACCTGGAGTTTAGGACGGAGGATGAGGCTTGCCAATTTTATACCGCTTATTCTTGTTGGCATGGATTTGTAATGAGGAAGGACGACGTGGTTAGGGATAATCAAGGTAGAATCATTAGCAGGCAACTTGTTTGCAACAAAGAGGGCTGGAGAAATATGAGGTATCTTGATATGGATGACAGATCAAGGGAGGCAAGGTCACTAATGCGAACCAAGTGTCCAGCTCGTCTTAGGGTAAAGCTTGACTACGGCTGCGGTAGATGGAAGGTATCATGTTTTGTGGAATCTCACAACCATGATCTGACGCCACCCCAATTTGCGCATCTGGTACCGGCCAATCGTCGTCTAACTGTGACTGATAGAGTCCAAGTGGAAAATCTTCATAATTTTGGTGTCAAGAGCTGCCATATTATGGGTTATATTGCATTCCAGAAGGGTGGATATCGTCATGCTGGCTTCACACGGAAAGATTTGTACAACCACATCGATCGCTATCGTCGGGCAAAAGTTAAAAACGGGAATGCCAATGCGGCAATAAACTATTTGATTGGCAAGTCAAACAACGATCCGCTGTTCTTTGGAAAGTATACGTTCACTAGTGACGAAAGGCTGGAGCATATTTTTTGGGCAGATGGGCAGTCAGTTATCGACTTTCACTGCTTTGGAGATATTGTTGCCTTTGATTCAACCTACAAGAAGAATAAATACAACAAGCCTTTGGTCATTTTCTCTGGATGCAATCATCACGGGCAGACTGTTATCTTCGGCTCCGGCCTACTATCCGACAAAACTACAGAGACGTATAAGTGGTTGTTGGAAACCTTTGTTGAAGCGATGGGTGGGAAAAGTCCAAAAGCAGTAATAACTGACGGAGACCTTGCCATGCGAGATGCAATCAAGAATGTTATGCCTGATGCGACCCATCGGTTATGCGGATGGCATCTGCAGAGAAATGCATGTGAAAATATAAAGAATCCTAATTTCTTGCGCGATTTTAAGGGTCTTATATACGACAACAACGAACAGAGAGACTTTGATCGGAGATGGGCAGCCATTTTGGATAAGCACAACCTTGTTGGCAGTACCTGGATGGAAACGACGTACGAAACTCGTGAGATGTGGTCCCATTGTTTCCTCCGGGATAAGTTTTTTGGTTACATAAGGACGACATCACAGTGTGAAAGTATAAATTCTCTCATCAGATTTTATGTTAATCGCAAGAACACCCTCATTGACTTCATGCATAACCTGGATAGGGCCTTAAAGGAGTATAGAAACAACGAATTAATAGCTGACTTTAAGTCTCAGTGCTCAGAGCCAGTGATGATTACCTCGTTAGAGGTATATGAAAGATCTGCATCATGTTATTTCACGCGAAACATCTTCAAGGAAATTCGTAATGAGATTCAGAGGGCAGGGGCTTTGAATATAACGGTACTAAGCACAACCTTGGACAAGGTAGAGTTCAGTGTGACTGCTCTCGGAGACCCGGCCAAAGATCGACGGGTGGAAGTCGATAGAGGTAAGAATCTGTTCTCGTGCTCGTGCAAGCTGTTTGAATTACGTGGTATTCCCTGTAGTCATATCTTCTGTGCCATGAAGTTCGAAAACATACTTGAGTTTCCAGATTCATTGATATACAAAAGGTGGACAAAGAATGCAAAGAACAAATTTATTAGCACAGAAATGCCTGTGAATGATGACATCGAAAGGGTCTTAAAGTTTCGAGTTGGAGCATTGGCATCGAATTGCAACAAGCTGTGTGATATTGCTTGCAAGGATCTTGCAGACTTTGATGAAGTCCAGTCTGAACTTGTCAATTTAGTTATCCGCCTGCAGTCACGCAAACAAGGCAAGTCAACTCCTAATGTTAACGTGGAAGGCATCAACGATCCATTTGTTGTCAAAAGCAAAGGAGCCCCTTCCAAGAGGTCTTCTTGGAGGAAGAAGAGAGCATGCTCTAATTGCCACAAGTACGGTCATTACTACAAGCGCTGTCCAGATCTGATGCAGCATAGTGTGGAAGGTAACCCTCGCGATCCATCATATGGCAATGCATCAGCCAAGGACTCAGGTTTTAGTCCAGAAAGGTTTGCTAATTCTTCGAGGTCGTTCTCAATTAAGTCCGAACACCAATCAGGACCTAATACCAAGCCTTTTAAAAAGGTTGGAACAAGGAAGTTTACGGCGACGGGTATGAGGAACCGGAAGGGTAAAGACAACACTTTTGTTGAGGTGAATGAGTCACAGCAGGACATGAGACATTCATTCAAGAACTATGAATGCGCTAATGATGTCGTTGATGATAAATGTGACACACGACATGTTCAGATCGATGTCCGAGATCCGTTAACATCGTCACTGCCTTGTGGCAACAAACAAGGATCGTACATGGCATTGTTCGCGTCGATGCACAGGACACTTTGA 2616 0.4339 MSIKEDDVKNDSDNDLGDDFDYQLNAEDDADDDDDVDSLDSTSKSEEVCGVKRIADLMVEDIWNLEFRTEDEACQFYTAYSCWHGFVMRKDDVVRDNQGRIISRQLVCNKEGWRNMRYLDMDDRSREARSLMRTKCPARLRVKLDYGCGRWKVSCFVESHNHDLTPPQFAHLVPANRRLTVTDRVQVENLHNFGVKSCHIMGYIAFQKGGYRHAGFTRKDLYNHIDRYRRAKVKNGNANAAINYLIGKSNNDPLFFGKYTFTSDERLEHIFWADGQSVIDFHCFGDIVAFDSTYKKNKYNKPLVIFSGCNHHGQTVIFGSGLLSDKTTETYKWLLETFVEAMGGKSPKAVITDGDLAMRDAIKNVMPDATHRLCGWHLQRNACENIKNPNFLRDFKGLIYDNNEQRDFDRRWAAILDKHNLVGSTWMETTYETREMWSHCFLRDKFFGYIRTTSQCESINSLIRFYVNRKNTLIDFMHNLDRALKEYRNNELIADFKSQCSEPVMITSLEVYERSASCYFTRNIFKEIRNEIQRAGALNITVLSTTLDKVEFSVTALGDPAKDRRVEVDRGKNLFSCSCKLFELRGIPCSHIFCAMKFENILEFPDSLIYKRWTKNAKNKFISTEMPVNDDIERVLKFRVGALASNCNKLCDIACKDLADFDEVQSELVNLVIRLQSRKQGKSTPNVNVEGINDPFVVKSKGAPSKRSSWRKKRACSNCHKYGHYYKRCPDLMQHSVEGNPRDPSYGNASAKDSGFSPERFANSSRSFSIKSEHQSGPNTKPFKKVGTRKFTATGMRNRKGKDNTFVEVNESQQDMRHSFKNYECANDVVDDKCDTRHVQIDVRDPLTSSLPCGNKQGSYMALFASMHRTL* 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2194 871 SMART 26again6 575 602 IPR006564 GO:0008270
Ahy1g2194 871 ProSiteProfiles Zinc finger SWIM-type profile. 564 600 IPR007527 GO:0008270
Ahy1g2194 871 Pfam MULE transposase domain 287 381 IPR018289 -
Ahy1g2194 871 MobiDBLite consensus disorder prediction 12 40 - -
Ahy1g2194 871 PANTHER OS02G0262500 PROTEIN 61 721 - -
Ahy1g2194 871 MobiDBLite consensus disorder prediction 1 43 - -
Ahy1g2194 871 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 61 721 IPR031052 GO:0006355
Ahy1g2194 871 Pfam FAR1 DNA-binding domain 75 165 IPR004330 -
Ahy1g2194 871 MobiDBLite consensus disorder prediction 736 785 - -
Ahy1g2194 871 MobiDBLite consensus disorder prediction 757 782 - -
Ahy1g2194 871 SUPERFAMILY Retrovirus zinc finger-like domains 702 734 IPR036875 GO:0003676|GO:0008270
Ahy1g2194 871 Pfam SWIM zinc finger 576 592 IPR007527 GO:0008270
Ahy1g2194 871 ProSiteProfiles Zinc finger CCHC-type profile. 716 731 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2194 Ahy-Chr1 99255544 99258553 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy1g2194 MULE 7.20E-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2194 - - ahf:112755379 1778.45