Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2182 ATGATGTCGAGCTGCAGCATGGATGCTGGACCTGAGCAACTGTGCTACATACCCTGCAACTTTTGCAACATTGTTCTTGCGGTGAGCGTTCCATGCACCAGCTTGTTCGACATGGTAACGGTTCGATGCGGTCACTGCACCAATCTCTGGTCCGTAAACATGGCTGCGGCCTTTCAATCACTCTCATGGCAAGATCTTCAGGGCCCTGGGCAGTGCAATCAGGAGTATAGGATTGACACAAATATTAATATGAATAATGGTGGCTCCTCTTCCAAATGCAACAATAGTAGTAGGCTTGCATCAATGCGTGCACCTACCAATCATGTTACTCAGGAAAGGGCTGTCAACCGCCGTGAGTCACCCGAGAAGAGGCAGCGCGTACCTTCTGCTTATAATCAGTTCATAAAGGAAGAGATCCAGAGGATTAAGGCTAATAATCCTGATATCAGTCACAGAGAAGCATTCAGTACTGCAGCAAAGAACTGGGCACATTTTCCTCATATTCATTTTGGGCTAATGTTGGAGAGCAACAATCAAGCTAATAAGATGGATAATGCCTCTGAGAAGCATTTGATGTCAAGGGCTGCACCTGCACTGTTGAATAAATGA 609 0.4614 MMSSCSMDAGPEQLCYIPCNFCNIVLAVSVPCTSLFDMVTVRCGHCTNLWSVNMAAAFQSLSWQDLQGPGQCNQEYRIDTNINMNNGGSSSKCNNSSRLASMRAPTNHVTQERAVNRRESPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLESNNQANKMDNASEKHLMSRAAPALLNK* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2182 202 Pfam YABBY protein 11 172 IPR006780 GO:0007275
Ahy1g2182 202 PANTHER AXIAL REGULATOR YABBY 5 2 190 - -
Ahy1g2182 202 SUPERFAMILY HMG-box 117 165 IPR036910 -
Ahy1g2182 202 PANTHER PROTEIN YABBY 6-RELATED 2 190 IPR006780 GO:0007275
Ahy1g2182 202 Gene3D High mobility group box domain 109 169 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2182 Ahy-Chr1 99060042 99063259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2182 12 180 C2C2-YABBY Transcription Factor Family AT2G26580 71.006 2.02e-80 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Ahy1g2182 YABBY 4.90E-70 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2182 K25796 - gmx:100499942 330.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2776 11 145069658 145072819 Ahy1g2182 1 99060042 99063259 hybridization