Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2178 ATGGCTACTAACATTGGAATTCTACTGCTACTAATTGTGGCATCATCACTAGCACAAGCTGCACAGCATGTAGTTCCATGGATGATTCCTACTACTCAAGGCTCCTCCTTCTACTCCAATTTGCTTGCTAAAACTACATTCAATCTAAACGACATTCTTGTCTTCAACTACACAACTGGGACACATAATGTTGTCACACTTTCAAAGGATGATTTCAAAGATTGCAGTGTCAAGAACAAGATGGAAACATTTGAGGTTGGACCTACAATGATCAAGCTCAATCGAACCGGAGAATACTATTTCGCCTGCGCCTTCCCGGCTCATTGCTCCCTTGGCCAGAAGCTTAGTGTCAATGTCATGGCCTCTTCTTCTTCCCCGGAGGCTGCACCAGCCGTGGCTCCTTCGTCCCCGGCGTCACGCCTCTCTGTTGCTGCTACTTTCTCTGTTCTTCTCATGCTCATTGCCATAAACATCTTGTTCTAG 483 0.4576 MATNIGILLLLIVASSLAQAAQHVVPWMIPTTQGSSFYSNLLAKTTFNLNDILVFNYTTGTHNVVTLSKDDFKDCSVKNKMETFEVGPTMIKLNRTGEYYFACAFPAHCSLGQKLSVNVMASSSSPEAAPAVAPSSPASRLSVAATFSVLLMLIAINILF* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2178 160 PANTHER BLUE COPPER PROTEIN 5 148 IPR039391 GO:0009055
Ahy1g2178 160 SUPERFAMILY Cupredoxins 32 119 IPR008972 -
Ahy1g2178 160 ProSiteProfiles Phytocyanin domain profile. 21 121 IPR003245 GO:0009055
Ahy1g2178 160 ProSitePatterns Type-1 copper (blue) proteins signature. 97 113 IPR028871 -
Ahy1g2178 160 Gene3D - 23 132 IPR008972 -
Ahy1g2178 160 Pfam Plastocyanin-like domain 32 113 IPR003245 GO:0009055
Ahy1g2178 160 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 5 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2178 Ahy-Chr1 98970390 98971425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2178 7 160 Phytocyanin Superfamily AT2G25060 27.439 1.70e-20 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2178 - - pvu:PHAVU_003G166500g 137.117