Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2176 ATGGCAAGGAACTTGGTGTTGGTGGTAGCAATAGTAGCCACGCTTCTCCATGGCTCAGCAGCTACAAGTCACGTGGTCGGAGACTCCACTGGATGGACCATCCCCTCCGGCGGCGCCTCCACCTACACCAGTTGGGCTTCTAAACAAACCTTCAAGCAAGGAGACACCCTTGTGTTCAATTTCGCCAACGGTCAACACGACGTTGCAAAGGTGACAAAATCAGCATACGATGCATGCAACGGTACAAATGCCATTACCACCGTAACAACCAGCCCAGCCACCATCACGCTCAACCAGACTGGCGAGCATTACTTCATATGCGCCTTTACTGGTCACTGCGCCGCCGGTCAGAAGCTCGCAGTTAACGTCACCAAGGCTTCTTCTCCTTCCCCTGCTCCTCAGCCTAGCTCTTCACCCAAGGCGGCTAGCCCTACCCCTGCCCCAAAATCAAGCTCCCCTGCCCCCACTCCGGCTTCCGCTCCAGCTTCCGCTCCGGTGACTTACACCGTTGGAGGCAGCTCAGGATGGATCATTCCTACTAGCGGCGGCGCTTCTTTCTACACTTCTTGGGCTTCCGGCAAGACCTTCAAAGTTGGAGACATTCTAGTGTTCAACTTCGCAAAGAACCAACACAACGTGGAGGAGGTAACAAAGAACAACTACGATGCATGCAGTACGAGTTCTCCGATCGCAACCTACAACGCTTCACCGGTCAGAGTCACCCTTAACAAGACCGGTGAACACTACTTCATCTGTGGATTTTCCGGCCATTGTGCCGCTGGTCAGAAGCTTGCCATCAACGTTACCGGTGGCACGGGCAGCACCCCCTCTTCTCCTTCCCCTTCCCCCTCCGGCTCCGAGACACCTTCTCCGGGTTCTTCACCTTCCAATCCTTCTTCTCCCTCTCCGGCAGGTAGTTCCGGTGGTAGCACTAGCCCACCACCAAAGGACTCCGGTGCTTCGTCTCTCAAAGCTGTCGGGTTCTCTGCCACTCTGATCTCACTAGTTGCTGCAGCATTTTTCTGTTAG 1029 0.5491 MARNLVLVVAIVATLLHGSAATSHVVGDSTGWTIPSGGASTYTSWASKQTFKQGDTLVFNFANGQHDVAKVTKSAYDACNGTNAITTVTTSPATITLNQTGEHYFICAFTGHCAAGQKLAVNVTKASSPSPAPQPSSSPKAASPTPAPKSSSPAPTPASAPASAPVTYTVGGSSGWIIPTSGGASFYTSWASGKTFKVGDILVFNFAKNQHNVEEVTKNNYDACSTSSPIATYNASPVRVTLNKTGEHYFICGFSGHCAAGQKLAINVTGGTGSTPSSPSPSPSGSETPSPGSSPSNPSSPSPAGSSGGSTSPPPKDSGASSLKAVGFSATLISLVAAAFFC* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2176 342 MobiDBLite consensus disorder prediction 269 322 - -
Ahy1g2176 342 MobiDBLite consensus disorder prediction 132 160 - -
Ahy1g2176 342 PANTHER PEELING CUPREDOXIN, PUTATIVE-RELATED 7 138 - -
Ahy1g2176 342 PANTHER PEELING CUPREDOXIN, PUTATIVE-RELATED 165 285 - -
Ahy1g2176 342 MobiDBLite consensus disorder prediction 125 164 - -
Ahy1g2176 342 CDD Stellacyanin 166 268 - -
Ahy1g2176 342 SUPERFAMILY Cupredoxins 166 268 IPR008972 -
Ahy1g2176 342 MobiDBLite consensus disorder prediction 282 298 - -
Ahy1g2176 342 Pfam Plastocyanin-like domain 177 262 IPR003245 GO:0009055
Ahy1g2176 342 Pfam Plastocyanin-like domain 32 117 IPR003245 GO:0009055
Ahy1g2176 342 PANTHER BLUE COPPER PROTEIN 7 138 IPR039391 GO:0009055
Ahy1g2176 342 Gene3D - 166 279 IPR008972 -
Ahy1g2176 342 Gene3D - 22 134 IPR008972 -
Ahy1g2176 342 ProSiteProfiles Phytocyanin domain profile. 22 125 IPR003245 GO:0009055
Ahy1g2176 342 PANTHER BLUE COPPER PROTEIN 165 285 IPR039391 GO:0009055
Ahy1g2176 342 ProSiteProfiles Phytocyanin domain profile. 166 270 IPR003245 GO:0009055
Ahy1g2176 342 SUPERFAMILY Cupredoxins 21 123 IPR008972 -
Ahy1g2176 342 MobiDBLite consensus disorder prediction 299 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2176 Ahy-Chr1 98965690 98967643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2176 168 340 Miscellaneous Gene Families AT5G20230 38.889 3.16e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2176 - - aprc:113846867 340.887
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2781 11 145246805 145247808 Ahy1g2176 1 98965690 98967643 hybridization