Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2149 ATGGCCATCTTTGCATTATTATTGATGCTGTTACTCCAATTGTCAATAATTTCTACCTCAGCAGTTATCTTGAGATCAAATGATTGTGGCACTGATTGGGTAGCTCGTTCATATTCTAGTGATGGTGAAGAACTGTTTTACATAAATGGAAATGTAGTTAACAAAGTTGCTTTCTGTGAGGCCCTCCAATTGTACATTGCAAATGGTTGCAATTTGAAGGACTACTTTGGAAGTAACAACTGCGCAATGGATGGCTCATTTGGAAGGAAACTACTTCAGAAGAATTCGAGCAGTAAATCCGAATCGCAAGGGGTTTCCAACGATGTGTCTCCCAAAGTTGGGCTTTTCGCTGGCGGAGCATTGTTGGTATGTTGTGCTGTTCTTTGTCCATGTATTTATGGGAAGAAGCGAAAAGCAACTGCTCATGCTGTTTTGACCAAGGACCCGAATTCAATATTGGACTCGGCTTCCTCCTTCGAAGCAAATTCTGTCCCGGAAAAGGTCCAAGTCCCAGCCAGTCCACTTCGAGTGCCACCTAGTCCTTCAAGATTCTCAGCGTCTCCAAAACTCAAAAGAATTGAATCGTTGCATCTCAACCTCAATCAGATTGCAAGAGCTACCCGTAACTTCTCAGAAACATTGCAGATAGGAGAAGGAGGTTTTGGAACTGTCTACAAGGCTCAGTTAGAAGATGGCCACGTCGTGGCTGTAAAACGTGCAAAAAGGGAACATTTTGAGAGCTTGAGAACTGAATTCAGCAGTGAAGTTGAACTTCTGGCTAAAATTGATCATCGGAACCTAGTGAAGCTACTAGGTTATATTGAAAAAGGACATGAACGCCTTCTTATTACAGAGTATGTGCCGAATGGTACTCTTCGAGAACACTTAGATGGTCAGCGTGGAAAAATCCTAGACTTCAATCAGCGCCTGGAAATTGCTATTGATGTTGCTCATGGCTTGACCTATTTGCATCTGTATGCAGAGAAGCCAATTATCCATCGAGATGTGAAATCATCCAACATTCTTCTGACAGAAAGCATGCGAGCTAAAGTTGCTGATTTTGGATTTGCAAGAATTGGCCCTATGAACTCCGATCAAACACACATTTCTACCAAAGTGAAGGGAACAGTTGGTTATTTGGATCCTGAGTATATGAAAACATACCAACTCACTACCAAGAGTGATGTTTACTCATTTGGAATTTTGCTTTTAGAAATTTTAACAGGTCGTCGTCCTGTGGAGTTGAAGAAAACTGTTGAAGAGAGGGTTACACTCAGATGGGCTTTCAGGAAGTTCAATGAAGGAAGGGTGGTGGAGCTGGTGGATCCATTAATGGAAGAAGCTGTAAACTCTGATGTTCTGATGAAGATGTTTGATTTGGCATTTCAGTGTGCAGCACCCGTCCGGACAGATAGACCTGACATGAAAGCAGTGGGAGAGCAATTATGGTCAATTAGGGCAGATTACTTTAAGAATTCAAGAAGTAATTAG 1491 0.4199 MAIFALLLMLLLQLSIISTSAVILRSNDCGTDWVARSYSSDGEELFYINGNVVNKVAFCEALQLYIANGCNLKDYFGSNNCAMDGSFGRKLLQKNSSSKSESQGVSNDVSPKVGLFAGGALLVCCAVLCPCIYGKKRKATAHAVLTKDPNSILDSASSFEANSVPEKVQVPASPLRVPPSPSRFSASPKLKRIESLHLNLNQIARATRNFSETLQIGEGGFGTVYKAQLEDGHVVAVKRAKREHFESLRTEFSSEVELLAKIDHRNLVKLLGYIEKGHERLLITEYVPNGTLREHLDGQRGKILDFNQRLEIAIDVAHGLTYLHLYAEKPIIHRDVKSSNILLTESMRAKVADFGFARIGPMNSDQTHISTKVKGTVGYLDPEYMKTYQLTTKSDVYSFGILLLEILTGRRPVELKKTVEERVTLRWAFRKFNEGRVVELVDPLMEEAVNSDVLMKMFDLAFQCAAPVRTDRPDMKAVGEQLWSIRADYFKNSRSN* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2149 496 SMART serkin_6 210 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g2149 496 ProSiteProfiles Protein kinase domain profile. 210 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g2149 496 Gene3D Transferase(Phosphotransferase) domain 1 287 495 - -
Ahy1g2149 496 ProSitePatterns Serine/Threonine protein kinases active-site signature. 331 343 IPR008271 GO:0004672|GO:0006468
Ahy1g2149 496 SUPERFAMILY Protein kinase-like (PK-like) 194 485 IPR011009 -
Ahy1g2149 496 Pfam Protein tyrosine and serine/threonine kinase 215 482 IPR001245 GO:0004672|GO:0006468
Ahy1g2149 496 ProSitePatterns Protein kinases ATP-binding region signature. 216 238 IPR017441 GO:0005524
Ahy1g2149 496 CDD STKc_IRAK 216 482 - -
Ahy1g2149 496 PANTHER NODULATION RECEPTOR KINASE-LIKE PROTEIN 96 493 - -
Ahy1g2149 496 Gene3D Phosphorylase Kinase; domain 1 182 286 - -
Ahy1g2149 496 PANTHER OS07G0166700 PROTEIN 96 493 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2149 Ahy-Chr1 98540296 98543994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2149 195 485 Receptor kinase-like Gene Family AT5G59700 45.704 7.50e-76 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Ahy1g2149 PK_Tyr_Ser-Thr 1.30E-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2149 - - aprc:113845864 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2814 11 145723330 145727054 Ahy1g2149 1 98540296 98543994 hybridization