Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2120 ATGGTGAGCTTGAAAGGGGGAACAAGGCCACCATGGGTGGGGCTGGGAGCTTCCGTGTGGGTTCAGGTGGCATCGGGAAATGGTTACACTTTCCCGCTCTATTCCCATTCTTTGAAGTCAGTCATGGGCTTCAACCAGCAGCAACTCACACTCCTCGGTGTTGCCAACGACATCGGCGAGAATGTTGGTATTCTTCCTGGCCTTGCTTCCAACAACTTCCCTCCATGGCTTCTCCTCTTCATCGGTGCTCTCTTCTCCTTCATTGGCTACGGCCTTCTCTGGCTCCCCCTCAGCCACACCCTCCCTTCTCTTCCCTACGCCTTGCTATGGTTTTCCCTGGTTGTTGCAACCAACAGTTGTGCGTGGTTAACCACCGGGATTCTTGTAACCAACATGAGGAATTTCCCTATCAGCAGAGGCACGGTGGCCGGAATCCTCAAAGGTTACGGCGGCCTCAGCGCCGCCGTCTTTACTCAAATCTACGGCATAGTTCTTCACAATTCATCCTCCAATTTCCTCTTGTTCCTTGCAATTGGTATTCCTGCTGTGTGCTTCAGCATGATGTTTCTTGTTAGGCCTTGCACTCCACTTTCCACTGAAGATTCCAAAGAGAAAGGGCATTTTCTGTTCATCCAAGCTTCAAGTGTGGTCTTGGGTTTATACATTCTTGCCACAAACATATTTGGTGACATTCTCACCTTGAGTGGTGCACTTTCCTACCTCTTGGTGGCTCTCATGATTCTACTCCTCATGGCTCCACTTGCTATCCCTATCAAGATGACACTCTGTCCCAAAACAGGATCCACCCGATCACAAACACCTAATGCCTCCTCGGAACGTTTGCCCCAAGAAGGAGCCAAAGAAGACAACACCGAGCCGCTGCTGGCGTCTTCCTCGGCCAGTGGGCTCGGAAGCTTCTACGACACGGATCCCTCGGCCGAGGTAGCAATGCTTCTGGCCGTGGGCGAGGGAGCCGTGAAGAAGAAGAGAAGGCCTAAAAGAGGGGAAGATTTTAAGTTCACAGAGGCAATAGTAAAGGCTGATTTCTGGCTACTATTTTTCATTTACTTTGTTGGTGTTGGAACTGGGGTCACTGTAATCAACAATCTAGCACAAATTGGCATTGCACAAGGTGAGGATGATACCACTATCTTGTTGTCCCTTTTCAGCTTTTTCAACTTTGTTGGTCGCCTTGGTGGAGGAGTCCTTTCAGAACATTTTGTCAAAACGAAAACAATTCCGCGCACGGTTTGGATGACATGCACTCAGGTAATGATGATGATCCTATACATCCTGTTTGCATATGCTATCAATGGGGCCCTATACCCTGCCATTGCACTTCTTGGAATCTGCTATGGAGTGCAATTCACAGTGGTGATTCCAACTGTGTCTGAGCTTTTTGGTTTGGAGCACTTTGGGATGTTGAGCAACTTCATATTCATGGGGAATCCACTTGGTGCATTCCTCTTCTCAGCACTTCTAGCAGGTACTGTGTATGACAATGAGGCTACAAGGCAACAAAGCATGGGAATCATTCCTTCAAGTGCTTCTTGCTTGGGCCCTGATTGCTTTAAGATCACATTCCTCACACTTTCTGCTGTTTGTGCTGTTGGTGCCTTTGCTGGTACCATCTTGGCTGTAAGAATTAAGCCTGTTTACCAAATGCTTTATGCTGGTGGTTCTTTCAAGTTGCCACAAACTTCTTCTTCACTTCACTAA 1719 0.4823 MVSLKGGTRPPWVGLGASVWVQVASGNGYTFPLYSHSLKSVMGFNQQQLTLLGVANDIGENVGILPGLASNNFPPWLLLFIGALFSFIGYGLLWLPLSHTLPSLPYALLWFSLVVATNSCAWLTTGILVTNMRNFPISRGTVAGILKGYGGLSAAVFTQIYGIVLHNSSSNFLLFLAIGIPAVCFSMMFLVRPCTPLSTEDSKEKGHFLFIQASSVVLGLYILATNIFGDILTLSGALSYLLVALMILLLMAPLAIPIKMTLCPKTGSTRSQTPNASSERLPQEGAKEDNTEPLLASSSASGLGSFYDTDPSAEVAMLLAVGEGAVKKKRRPKRGEDFKFTEAIVKADFWLLFFIYFVGVGTGVTVINNLAQIGIAQGEDDTTILLSLFSFFNFVGRLGGGVLSEHFVKTKTIPRTVWMTCTQVMMMILYILFAYAINGALYPAIALLGICYGVQFTVVIPTVSELFGLEHFGMLSNFIFMGNPLGAFLFSALLAGTVYDNEATRQQSMGIIPSSASCLGPDCFKITFLTLSAVCAVGAFAGTILAVRIKPVYQMLYAGGSFKLPQTSSSLH* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2120 572 Pfam Nodulin-like 11 258 IPR010658 -
Ahy1g2120 572 CDD MFS_Mch1p_like 10 539 - -
Ahy1g2120 572 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 570 - -
Ahy1g2120 572 PANTHER NODULIN-LIKE/MFS TRANSPORTER 3 570 - -
Ahy1g2120 572 Gene3D MFS general substrate transporter like domains 345 553 IPR036259 -
Ahy1g2120 572 SUPERFAMILY MFS general substrate transporter 17 196 IPR036259 -
Ahy1g2120 572 SUPERFAMILY MFS general substrate transporter 222 551 IPR036259 -
Ahy1g2120 572 MobiDBLite consensus disorder prediction 267 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2120 Ahy-Chr1 98319347 98321828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2120 5 568 Nodulin-like Gene Family AT1G80530 54.770 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2120 - - gmx:100787328 827.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2839 11 145959528 145961956 Ahy1g2120 1 98319347 98321828 hybridization
Ahy1g2120 1 98319347 98321828 Ahy13g2538 13 76563829 76567394 PCT
Ahy13g2538 13 76563829 76567394 Ahy1g2120 1 98319347 98321828 PCT