Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2107 ATGTCACTGACTGGTAAACCCCCTCCTGAGATCAGAATTGAAGGAGAGAATTGCCCTCGTGCGGTGGTGGAATGGTACCAATGTTCTGCGCCAAAGGATCGAAGACACGATTTTGACCTGAGCTTGAAGGCGAAGAAACACCTCGTTTCGTTGGGTTGGACCTTTTCTTATTGCGACAAGAAAACTCGCTGGGAACTTCGTTACAAATCCCCTTCTGGTAAGACCTATACTTCTCTCAGAACTGCATGCAAAGCCTGCATTGGAGAGAAAAAGAAAGATTCTTCATCTAGTTCCAATTCATTGCAAGGATCACAGCAATCTCAATCCCAATCTCTACCTGCTCAACAACCAACGAGTTCCAAGGTAACCGGTGGTAGGCCTCGGAAACGCAAGAAACCGAGTGACGATGAAGATTGGACTCTTCCGGAGACGCAAGTATCCAATTTAGTAAGTCCTCGTTCTGGTTCTCGTGCACGTGGCGGTGGCAGTGGCCGTCGTCGTCGTGATTCTGGTGAAAGTCCTAATGCCGCAAGAAAAGTAAGGAGGGCACGGAGTTCTTCTGATGATCCAAGAACGATTCTTTCTTGGCTGATTGACAACAATGTGGTGGCGCAGGAGGCGTGGGTTTTCTGCCGTGGAGGGAAAGATAATGAATTGGTGAAGAGAGGGAAGCTGTTTCGTTCTGGTATTTTCTGCCATTGTTGTGATTCTTTATGCACACTCTCTCAATTCCAGGGTCATGCCGGTTGCAAAGGTCAACCTCCCTCTGCTAGTATCTTCTTGGAACAAGATAAAAGGTCTTTGTTGGATTGCCAGAAACAAGCATTGATGATGATCAAGGCTAACAACAATGGGGATAATGATCATCATCATGAAAATGATTCCATTTGTTCAATTTGTCTCCAGGGGGGTTTCATTCTTCTCTGTGATCGCTGTCCGGCGTCATTCCACGCCGAATGTATTGGCCTTGATCATGTTCCCCCTGGTGATTGGTTCTGCCCTTCATGCTCTTGCAGAATTTGCAACCGTCCCAAATGCATAGAAGATTCTTGTAGAGAGGAAAGTCATTTGGCTAACAATTTTATAGCTTGTTATCAGTGTCAACGCAGATTCCACATTGGATGTTTAGCTTCTAGAGGCTTTGCTTTTCTGAACATGGAAACCGATTGGTTTTGCAATGAAGATTGTCAGAAGATATTTTTGACACTGAATAACATGTTGGGAAAACCAATTCCTGTGGGTGATGGTAATCTAACTTGGACATTGTTGACGAGCCTCAAGAAAAGCACTAATGACAATGATGACGATGGAACCATTACTGAAATGGAGAGCAAGCTAAATGTCGCACTTGGAATAATTCATGAGTGTTTTGAGCCCATCATAGATCCTGTATTTGGAAGAGACATTGCTGCAGATATTATGTTCAGCAGATATTCATGGCTGCCACGTATGAACTTTACAGGGTTCTACACTGTGATTCTAGAGAGGAATGATGAGGTGATCTCTGTTGCAAACACAAGGATTTATGGCCAAAAGGTTGCAGAAGTGCCGCTTGTCGCGACGAGTGAGCAGTATCGAAAGCAGGGAATGTGTCGAATTCTGATGGATCAGCTTGAGAAGCTGTTGGATAAGTTGGGTGTTGAGAGGTTGCTATTGCCTGCTGCTCCTTATTTAGTAGAAACTTGGACAAACTCATTTGGATTTGCAAAAATGACACACTCAGATCAGTATTACTGTGTAGGTTATCCTCTTGCAAATTTTCCAGACACAACATTGTGCCACAAATCATTGAAGCAACCTTTGATGCTGTATTGA 1815 0.4413 MSLTGKPPPEIRIEGENCPRAVVEWYQCSAPKDRRHDFDLSLKAKKHLVSLGWTFSYCDKKTRWELRYKSPSGKTYTSLRTACKACIGEKKKDSSSSSNSLQGSQQSQSQSLPAQQPTSSKVTGGRPRKRKKPSDDEDWTLPETQVSNLVSPRSGSRARGGGSGRRRRDSGESPNAARKVRRARSSSDDPRTILSWLIDNNVVAQEAWVFCRGGKDNELVKRGKLFRSGIFCHCCDSLCTLSQFQGHAGCKGQPPSASIFLEQDKRSLLDCQKQALMMIKANNNGDNDHHHENDSICSICLQGGFILLCDRCPASFHAECIGLDHVPPGDWFCPSCSCRICNRPKCIEDSCREESHLANNFIACYQCQRRFHIGCLASRGFAFLNMETDWFCNEDCQKIFLTLNNMLGKPIPVGDGNLTWTLLTSLKKSTNDNDDDGTITEMESKLNVALGIIHECFEPIIDPVFGRDIAADIMFSRYSWLPRMNFTGFYTVILERNDEVISVANTRIYGQKVAEVPLVATSEQYRKQGMCRILMDQLEKLLDKLGVERLLLPAAPYLVETWTNSFGFAKMTHSDQYYCVGYPLANFPDTTLCHKSLKQPLMLY* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2107 604 CDD NAT_SF 492 552 - -
Ahy1g2107 604 MobiDBLite consensus disorder prediction 92 123 - -
Ahy1g2107 604 Pfam PHD-finger 296 338 IPR019787 -
Ahy1g2107 604 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 473 585 IPR016181 -
Ahy1g2107 604 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 437 589 IPR000182 GO:0016407
Ahy1g2107 604 MobiDBLite consensus disorder prediction 90 189 - -
Ahy1g2107 604 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 339 399 IPR013083 -
Ahy1g2107 604 MobiDBLite consensus disorder prediction 140 154 - -
Ahy1g2107 604 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 285 338 IPR013083 -
Ahy1g2107 604 SMART PHD_3 338 397 IPR001965 -
Ahy1g2107 604 SMART PHD_3 296 337 IPR001965 -
Ahy1g2107 604 MobiDBLite consensus disorder prediction 162 188 - -
Ahy1g2107 604 Pfam Tify domain binding domain 223 275 IPR032308 -
Ahy1g2107 604 Pfam Acetyltransferase (GNAT) domain 486 571 IPR000182 GO:0016407
Ahy1g2107 604 SUPERFAMILY FYVE/PHD zinc finger 273 338 IPR011011 -
Ahy1g2107 604 Gene3D - 475 584 - -
Ahy1g2107 604 ProSiteProfiles Zinc finger PHD-type profile. 294 339 IPR019787 -
Ahy1g2107 604 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 10 600 - -
Ahy1g2107 604 PANTHER DUF724 DOMAIN-CONTAINING PROTEIN 4-RELATED 10 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2107 Ahy-Chr1 98134310 98136124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2107 40 545 PHD Transcription Factor Family AT5G58610 34.622 1.68e-92 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Ahy1g2107 Acetyltransf_1 0.0001 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2107 - - aip:107608518 1065.06