Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2101 ATGGCTTTCCACGAGCACCATATGCAGCACGAGATAGCGTTTCAGCGCTTCACCGAGGAGCAAGAACTAACAGCAGAGAATAGGGACATGCAGCAGCAGAGGGCGGCGGGGGTGGTTGCGCCGCCGACGTGGCTCAACAACCCTAGCAGTCATCATCATCGACAGCAGCAGAATTTCCTGCACCAGCTGCAACCACCACCACCACCACCACCGGAGACAGCGACGACGACGGAGAAGAGCATGGATCGGAACACAAGTTTCGAATCGTCGGATGAATTGAGGGAATACAAAGCAGACATCTTAGGACACCCGCTGTACGACCAGCTTCTGTCGGCTCATGTTTCTTGCCTGAGAATCGCCACGCCGGTTGACCAGCTTCCACGGATCGACGCGCAGTTGCAGCAGTCGCAGCGCGTCGTTGATAAGTACTCTGCCCTCGCAAACCCTGTCGTTGATGACAAGGAGCTCGATCACTTCATGACACATTATGTTCTGCTGCTATGTGCGTTCAAGGAACAGTTGCAGCAACATGTCCGTGTTCATGCCATGGAAGCAGTGATGGCTTGTTGGGATCTTGAGCAGTCTCTACAAAGCTTGACCGGTGTATCTCCTGGGGAAGGAACGGGAGCAACAATGTCGGACGACGAAGATGAGCAAGCGGAGAGCAACGGTGGCGGCGGCGGCGGCGGGGGGAACCTATACGAAGGAAGCTTTGACGGTGTTGATAGTCTTGGTTTTGGTCCTCTTGTGCCGACTGAGAGTGAAAGATCGTTGATGGAGCGAGTGAGGCATGAACTGAAGCATGAACTCAAACAGGGTTACAAGGAGAAGATCGTTGACATCCGTGAAGAGATTCTCCGCAAGAGAAGAGCTGGCAAGCTTCCTGGTGACACCACCTCCCTTCTCAAAGCTTGGTGGCAATCACATTCTAAATGGCCCTACCCTACTGAGGAAGACAAGGCCAGGCTGGTGCAGGAAACTGGATTGCAATTAAAGCAGATAAATAATTGGTTCATAAATCAAAGGAAAAGGAACTGGCATACTAACCCCTCTTCCTCTAGTAACTCTAAAACCAAGCGAAAGAGCAGTGCAGGTGAGAGCAGTAACCAAAGCTTCATGTGA 1122 0.5223 MAFHEHHMQHEIAFQRFTEEQELTAENRDMQQQRAAGVVAPPTWLNNPSSHHHRQQQNFLHQLQPPPPPPPETATTTEKSMDRNTSFESSDELREYKADILGHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLQQSQRVVDKYSALANPVVDDKELDHFMTHYVLLLCAFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEGTGATMSDDEDEQAESNGGGGGGGGNLYEGSFDGVDSLGFGPLVPTESERSLMERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHTNPSSSSNSKTKRKSSAGESSNQSFM* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2101 373 MobiDBLite consensus disorder prediction 43 61 - -
Ahy1g2101 373 SMART HOX_1 287 352 IPR001356 GO:0003677
Ahy1g2101 373 Pfam ELK domain 265 286 IPR005539 GO:0003677
Ahy1g2101 373 SMART ELK_2 265 286 IPR005539 GO:0003677
Ahy1g2101 373 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 29 366 - -
Ahy1g2101 373 ProSiteProfiles ELK domain profile. 265 285 IPR005539 GO:0003677
Ahy1g2101 373 Gene3D - 291 368 - -
Ahy1g2101 373 PANTHER CLASS II KNOTTED-LIKE HOMEOBOX PROTEIN 29 366 - -
Ahy1g2101 373 SUPERFAMILY Homeodomain-like 287 352 IPR009057 -
Ahy1g2101 373 MobiDBLite consensus disorder prediction 342 373 - -
Ahy1g2101 373 SMART KNOX2_2 146 201 IPR005541 GO:0003677|GO:0005634
Ahy1g2101 373 MobiDBLite consensus disorder prediction 200 234 - -
Ahy1g2101 373 Pfam KNOX1 domain 96 137 IPR005540 GO:0003677|GO:0005634
Ahy1g2101 373 Pfam Homeobox KN domain 305 344 IPR008422 GO:0003677|GO:0006355
Ahy1g2101 373 CDD homeodomain 288 349 IPR001356 GO:0003677
Ahy1g2101 373 ProSiteProfiles 'Homeobox' domain profile. 285 348 IPR001356 GO:0003677
Ahy1g2101 373 MobiDBLite consensus disorder prediction 41 89 - -
Ahy1g2101 373 SMART KNOX1_2 94 138 IPR005540 GO:0003677|GO:0005634
Ahy1g2101 373 Pfam KNOX2 domain 150 200 IPR005541 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2101 Ahy-Chr1 98071184 98075573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2101 96 368 Homeobox Transcription Factor Family AT5G11060 81.949 3.58e-164 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Ahy1g2101 KNOX2 1.40E-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2101 - - gmx:100781997 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2858 11 146207593 146212246 Ahy1g2101 1 98071184 98075573 hybridization