Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2068 ATGCAACCTTGTAGCAGAGAAATGCAAAGCCTCAACTCCCTCTTCAACAATCAGCAGCAGATCCAAATGGACCCTGCTACTTCTCAAGAAGACGATTTCATCAAGCAGATGCTTTCTACTATCCCTCCTCCACCACCTCCTTCATGGAACCTTGACCATACTCCTCCTAACCCTAAGCCTTACTGGCTTGACAACGACAATGTCGCTTTCCCTAACTACGACGACCCTTCCACTCTCGCTTCCAAGTTCCGTAACCACCAGATCACCGCTACTTCCTCCTCCAAGGCCGCCGCCGCCGCTCTCTTGCTCCAACAGCAGCTTCTCATGACCAGAGGCCTCTCCGGTGCTGATTCCGCCATCCTTCACCACATGTTTGACTCTTCCCAAAACGACGTCGTCGACGCCTCCTCCTCCTCCTTCAAATCTCCCAATCCAAGCTCCGCCGACGGTTCCGTTCAAGCTCTGTACGACGGTTTCACCGGATCTCTCCAGGGCGCTGCTCTAGCATCCAATCAGACTCACCATTTTCAGCATCCACAGGTTCAGACAAGTTCAAATCCGAATCAGATGCAGGGGCAGGGGCAGGGAACGAGCCAAGGTGGGAACCCGAACCCGAACCCGGGTCAGCCGAAACAGAGGGTTAGGGCGAGGAGAGGTCAAGCCACGGACCCACACAGCATCGCTGAGAGGTTGCGAAGGGAAAGGATCGCGGAGAGAATGAAGGCCTTGCAGGAATTGGTTCCCAACGCCAACAAGACAGACAAGGCCTCCATGCTAGATGAGATCATCGACTATGTGAAATTCCTACAGCTCCAAGTCAAGGTTCTTAGCATGAGCAGATTGGGAGGTGCAGCTGCTGTTGCTCCGCTTGTTGCTGATATAAACTCCGAGGGAGGCGGTGACTGCGTCCAAACCAACGGCAACCAAACGGCAGGGGCTTCATCCTCCAACGACAGCCTCACCATGACGGAGCAACAGGTGGCTAAGCTCATGGAGGAGGACATGGGTTCCGCCATGCAGTACCTCCAGGGTAAGGGCCTCTGCCTCATGCCAATCTCCCTAGCCACCGCCATTTCCACCGCCACTGCCACGTGTCACCCCAGGAACCCCATCATGAACCCCACTGATGGACCTTCCTCTCCCGGCATGTCAGTCCTCACGGTGCAGTCTGCTAACGGCGACGCCGTCAAGGACGCCACCTCCGTTTCCAAGCCCTAA 1218 0.5558 MQPCSREMQSLNSLFNNQQQIQMDPATSQEDDFIKQMLSTIPPPPPPSWNLDHTPPNPKPYWLDNDNVAFPNYDDPSTLASKFRNHQITATSSSKAAAAALLLQQQLLMTRGLSGADSAILHHMFDSSQNDVVDASSSSFKSPNPSSADGSVQALYDGFTGSLQGAALASNQTHHFQHPQVQTSSNPNQMQGQGQGTSQGGNPNPNPGQPKQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADINSEGGGDCVQTNGNQTAGASSSNDSLTMTEQQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATATCHPRNPIMNPTDGPSSPGMSVLTVQSANGDAVKDATSVSKP* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2068 405 MobiDBLite consensus disorder prediction 173 209 - -
Ahy1g2068 405 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 220 269 IPR011598 GO:0046983
Ahy1g2068 405 MobiDBLite consensus disorder prediction 133 153 - -
Ahy1g2068 405 Pfam Helix-loop-helix DNA-binding domain 225 270 IPR011598 GO:0046983
Ahy1g2068 405 Gene3D - 215 277 IPR036638 GO:0046983
Ahy1g2068 405 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 25 371 - -
Ahy1g2068 405 MobiDBLite consensus disorder prediction 173 227 - -
Ahy1g2068 405 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 218 280 IPR036638 GO:0046983
Ahy1g2068 405 PANTHER TRANSCRIPTION FACTOR BHLH69 25 371 - -
Ahy1g2068 405 SMART finulus 226 275 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2068 Ahy-Chr1 97724042 97728102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2068 197 404 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 64.807 1.36e-90 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy1g2068 HLH 1.50E-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2068 - - jre:109000831 381.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2898 11 146568371 146572365 Ahy1g2068 1 97724042 97728102 hybridization