Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2060 ATGGGTTTGGGAGTGATTGGCACTGTTCTAATTTTGGGACTCTTGTTCAAGCATTTGGCTTCTCAGCAACCAAACACTGATGAGTTCTATGTGTCTGAGTTCTTGAAGAAAATGGTTTCCAATTCTTCTTCTTTTTCCTCCTACAATTTCTCAGCTTCAGTGTGTTCATGGCAAGGAGTTTTCTGTGACAACAACAAAGAACATGTTGTTGAGTTAAACTTTTCAGGTTTAGGCCTCTCTGGAACTATTCCTGATAACACCATAGGCAAGCTGAGCAAGCTTCAAACTTTGGATCTTAGCTGCAACAAGATCACAACTTTGCCTTCAGATTTTTGGAGTTTAAGCTCTATCAAGAGCCTCAACCTCTCCACCAATCAGATTTCAGGTTCATTGACCAACAACATTGGCAACTTTGGTATGCTTGAAACCATTGACTTGTCAAGCAACAACTTCACTGAAGAAATACCAGAAGCTATTGGATCCCTTATGAGTTTGAGAATCCTCAAACTTGACCATAACAAATTCTCAAGAAGCATTCCTTCTGGGATTCTCAAGTGCCAGTCCCTGGTTTCAATTGATCTCTCATCAAATCAATTGAATGGAACACTTCCAAATGGTTTTGGTGCTGCTTTTCCCAAGCTCAAGAACTTGAACCTTGCTGCCAATGATATAGATGGCCGAATCTTGGATATTTCAGGGAATCAGCTAAGTGGTGAAATTTTCCAGAACTTGTTGAGTTTGAGTGAGTCCTTGTTGAATCTAAAGCACCTCAATCTTGCACACAACAGATTCTCCAAACAGAAATTCCCAACAAAGATTGAAAAGCTCCAAGGATTGGAGTATCTGAACTTGTCCAAAACCAATCTTGTAGGCCTAATCCCTGATGAAATCTCAAAACTGAGTAATCTCAATGTTCTTGATCTTTCTATGAATCATCTTGCTGGTAAAGTTCCAATTTTGAGGAACAAACACCTCCAAATTCTTGACCTTTCAAACAACACCTTGAGTGGAACAATCCCTTTGTCTGTCTTGGGGAAACTACCATTCATGGAGAGATACAACTTCTCTTACAATAACTTAACACTGTGTGCTTCAGACATTCACCCTGATGTTCTTGAATCAGCATTCTTTGGATCAGTGAACAGTTGTCCAATTGCTGCAGACCCACATTTCTTCAGGAGAAAGAACAATGGACACAACAAGGGAATGAAGCTAGCATTGGTGTTAACCTTCTCAATGATCTTCATGCTTGCTGGCCTGTTGTTCTTAGCATTCGGCTGCCGAAGGAAATCGAAAATGTGGCAAGTTAAACAAACTTCATACAAAGAAGAACAGAACATTTCCGGGCCTTTCTCATTCCAGACTGATTCAACAACCTGGGTGGCTGATGTTAAGCAGGCAACATCAGTTCCGGTCGTAATCTTTGAGAAGCCTTTGTTGAACATTACATTTGCAGACTTACTGGCTGCAACTTCAAATTTCGACCGAGGTACTCTTTTGGCCGAAGGAAAATTCGGTCCGGTCTATAGAGGCTTTCTTCCTGGTGGTATTCATGTGGCAGTTAAAGTTTTGGTGGTTGGTTCTACATTGACAGATCAAGAAGTGGCTAGAGAGCTTGAGTTTCTTGGCAGAATCAAGCATCCCAATCTTGTTCCTTTAACTGGATATTGTGTAGCAGGGGATCAGAGGATTGCTATATATGATTACATGGAGAATGGAAACCTGCAAAATCTGCTATATGACTTGCCACTTGGTGTGCAAAGCACTGATGATTGGAGCACAGATACATGGGATGAATCTGACAACAATGGAATTCAGAATGCTGGCTCTGAAGGATTGCTCACAACTTGGAGATTTCGTCACAAAATCGCCCTTGGAACCGCTCGAGCTCTCGCTTTCTTGCACCATGGATGCTCTCCTCCAATCATTCATAGAGCAGTCAAGGCCAGCAGTGTTTATTTGGACTATGATCTCGAGCCCAGGCTGTCTGATTTCGGCCTGGCTAAGATCTTTGGAAGCGGCTTGGACGAGGAGATTGCTCTTGGTTCCTCTGGTTATGTTCCGCCGGAGTTTTCCCAACAAGAATTCGAGTCACCAACCACGAAATCTGATGTATATTGTTATGGAGTTGTGCTCTTTGAGCTAGTAACCGGAAAGAAGCCGGCCGGAGATGCTTACCCTGATGACAAGGAATCAACTTTGGTTAGCTGGGTGAGAGGACTAGTTAGAAAGAATCAAGCTTCAATAGCAATTGATCCAAAGATTAGGGACACAGGAGTAGATGAACAAATGGAGGAGGCTCTCAAGATTGGTTATCTTTGCACTGCTGACTTGCCGGCCAAGCGACCAACAATGCAGCAGATTGTTGGACTTCTAAAAGACATTGAACCTATTGCTTCTAATTAG 2406 0.4231 MGLGVIGTVLILGLLFKHLASQQPNTDEFYVSEFLKKMVSNSSSFSSYNFSASVCSWQGVFCDNNKEHVVELNFSGLGLSGTIPDNTIGKLSKLQTLDLSCNKITTLPSDFWSLSSIKSLNLSTNQISGSLTNNIGNFGMLETIDLSSNNFTEEIPEAIGSLMSLRILKLDHNKFSRSIPSGILKCQSLVSIDLSSNQLNGTLPNGFGAAFPKLKNLNLAANDIDGRILDISGNQLSGEIFQNLLSLSESLLNLKHLNLAHNRFSKQKFPTKIEKLQGLEYLNLSKTNLVGLIPDEISKLSNLNVLDLSMNHLAGKVPILRNKHLQILDLSNNTLSGTIPLSVLGKLPFMERYNFSYNNLTLCASDIHPDVLESAFFGSVNSCPIAADPHFFRRKNNGHNKGMKLALVLTFSMIFMLAGLLFLAFGCRRKSKMWQVKQTSYKEEQNISGPFSFQTDSTTWVADVKQATSVPVVIFEKPLLNITFADLLAATSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVVGSTLTDQEVARELEFLGRIKHPNLVPLTGYCVAGDQRIAIYDYMENGNLQNLLYDLPLGVQSTDDWSTDTWDESDNNGIQNAGSEGLLTTWRFRHKIALGTARALAFLHHGCSPPIIHRAVKASSVYLDYDLEPRLSDFGLAKIFGSGLDEEIALGSSGYVPPEFSQQEFESPTTKSDVYCYGVVLFELVTGKKPAGDAYPDDKESTLVSWVRGLVRKNQASIAIDPKIRDTGVDEQMEEALKIGYLCTADLPAKRPTMQQIVGLLKDIEPIASN* 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2060 801 Pfam Protein tyrosine and serine/threonine kinase 498 790 IPR001245 GO:0004672|GO:0006468
Ahy1g2060 801 Gene3D Phosphorylase Kinase; domain 1 454 569 - -
Ahy1g2060 801 ProSiteProfiles Protein kinase domain profile. 494 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g2060 801 Gene3D Ribonuclease Inhibitor 135 228 IPR032675 -
Ahy1g2060 801 Gene3D Transferase(Phosphotransferase) domain 1 570 800 - -
Ahy1g2060 801 Gene3D Ribonuclease Inhibitor 229 374 IPR032675 -
Ahy1g2060 801 Pfam Leucine Rich repeat 322 337 IPR001611 GO:0005515
Ahy1g2060 801 PRINTS Leucine-rich repeat signature 300 313 - -
Ahy1g2060 801 PRINTS Leucine-rich repeat signature 189 202 - -
Ahy1g2060 801 PANTHER CONCANAVALIN A-LIKE LECTIN/GLUCANASE DOMAIN-CONTAINING PROTEIN-RELATED 1 232 - -
Ahy1g2060 801 PANTHER CONCANAVALIN A-LIKE LECTIN/GLUCANASE DOMAIN-CONTAINING PROTEIN-RELATED 229 797 - -
Ahy1g2060 801 ProSiteProfiles Leucine-rich repeat profile. 324 345 IPR001611 GO:0005515
Ahy1g2060 801 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 229 797 - -
Ahy1g2060 801 SUPERFAMILY L domain-like 48 365 - -
Ahy1g2060 801 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 232 - -
Ahy1g2060 801 Pfam Leucine rich repeat 82 127 IPR001611 GO:0005515
Ahy1g2060 801 Pfam Leucine rich repeat 253 313 IPR001611 GO:0005515
Ahy1g2060 801 Gene3D Ribonuclease Inhibitor 30 134 IPR032675 -
Ahy1g2060 801 SMART LRR_typ_2 91 113 IPR003591 -
Ahy1g2060 801 SMART LRR_typ_2 251 276 IPR003591 -
Ahy1g2060 801 SMART LRR_typ_2 300 322 IPR003591 -
Ahy1g2060 801 SMART LRR_typ_2 162 186 IPR003591 -
Ahy1g2060 801 SMART LRR_typ_2 114 138 IPR003591 -
Ahy1g2060 801 SUPERFAMILY Protein kinase-like (PK-like) 471 792 IPR011009 -
Ahy1g2060 801 ProSiteProfiles Leucine-rich repeat profile. 93 114 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2060 Ahy-Chr1 97555274 97558858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2060 64 796 Receptor kinase-like Gene Family AT4G39400 34.738 2.37e-113 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Ahy1g2060 PK_Tyr_Ser-Thr 2.30E-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2060 - - adu:107459185 1272.3