Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2049 ATGGCTTCTTCTAGCCGTCAACAAAACGAGCATTCTCCTTCTACTTCTACTGTGATTTGTTTTTTTAAGATTGTTCTCAGACAAGCTCTTCAAGATGAAAACTTTCCTCCAGATGGTACTGAATGGAGCATAGAGTGGATTAATCATGATGGTGAAATTTTATTTAAAAACGGTTGGAAAGAGTTTGTTGCATATTACTCTCTTGATCATGGCCATTTGTTACGGTTTGGGTACAATATTGGAACATCTCACATGGAAGTACACATATTTGACATGAGTTGCCTCCAAATAGAGTATCCTGCCAATGATCAGATCAAAGAGCAGCTGCCACGCAGGGGTCAGCAGCCGGTGAAAAAGCAAGAAGAACAAAAAACTAGAGATGTGGATAGCAATCGCAACACCCAAAACATGAGACTTAACGAGGGATCGCAGAAGAAAAGATTGAATGAACCATTGCCAAGAGAACTCCGAGGCCAACCGAGGAAAAAACTAAGAGCACTACTGTCATCTGGTTCTAAAGATAGGCAGTTGGAAAATGACACACAAATCAAGGATGTGGAAAGAAGCTTTGATTCGCACGGTATTAAATCCAAAGAAAAAAACCATGAGATGCCAGTGTCTGTCAATCAAGATTCTAATGGTAAAAGGAATAGAAGAAGAAAAGATTCTGAATCTCCTGTTATGCCCTGTCCTATAAGACTTAAATCTCTGAAAGAAGCTATGAAATTTAAGTGGGAAAAGCCCTCTTTCATCATCAAGATAACGCAACGGTCTCAAACGAGAGCACCATGTTACTTTTCAACTAAATTCTTCAGAAAATATTTTATAAATAATCCACAAAATACAAATATAAGGTTTGGAAAGAAGTTGTTCCCTGTCAAGTTGATCTATAGGCCATCATCATGTGTTGCCTTTATCTCTGCTGGTTGGAACCTTTTTGCTCGAGCTAGTAAATTACAAGCCGGAGATATTTGTTTGTTTAAGCTCATCAATAAAAAAGATCCGGTGCTTGATGTTCATATTTGTCGTCGACAACGCCGCGAGTCACTTAAACCAGTGACTCATGGGATTCAACTCTTCAAAGAAGTTAAGGAGCTCAACTCACAGAATCCCTCTTTCATGGTCAAGATAAGAGACAGTAATCCAAGGAGATCAAGGCCTAACTTATCAGCTATCTTCTACAGAAAGTATTTTAAAAAGAATCAGCAGGATGTAAAGTTACAGTTTGGAAAGGAATCGTGGCCTGCTACGATAATCTACAATCCGACATCGAAAAATAGCTTTATTTCGGCTGGTTGGAGTTCTTTTGCTAGAGCAAGTAAATTAGAAGCTGGAGATGTTTGTGTTTTTGAACTCATCAATAAAAAAGATCTATTTGATGTTCATATTTGTAGAACCCAATACTAG 1407 0.3824 MASSSRQQNEHSPSTSTVICFFKIVLRQALQDENFPPDGTEWSIEWINHDGEILFKNGWKEFVAYYSLDHGHLLRFGYNIGTSHMEVHIFDMSCLQIEYPANDQIKEQLPRRGQQPVKKQEEQKTRDVDSNRNTQNMRLNEGSQKKRLNEPLPRELRGQPRKKLRALLSSGSKDRQLENDTQIKDVERSFDSHGIKSKEKNHEMPVSVNQDSNGKRNRRRKDSESPVMPCPIRLKSLKEAMKFKWEKPSFIIKITQRSQTRAPCYFSTKFFRKYFINNPQNTNIRFGKKLFPVKLIYRPSSCVAFISAGWNLFARASKLQAGDICLFKLINKKDPVLDVHICRRQRRESLKPVTHGIQLFKEVKELNSQNPSFMVKIRDSNPRRSRPNLSAIFYRKYFKKNQQDVKLQFGKESWPATIIYNPTSKNSFISAGWSSFARASKLEAGDVCVFELINKKDLFDVHICRTQY* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2049 468 PANTHER B3 DOMAIN-CONTAINING 37 343 - -
Ahy1g2049 468 PANTHER B3 DOMAIN-CONTAINING 352 466 - -
Ahy1g2049 468 SUPERFAMILY DNA-binding pseudobarrel domain 366 465 IPR015300 -
Ahy1g2049 468 CDD B3_DNA 371 465 IPR003340 GO:0003677
Ahy1g2049 468 Pfam B3 DNA binding domain 262 345 IPR003340 GO:0003677
Ahy1g2049 468 Pfam B3 DNA binding domain 384 466 IPR003340 GO:0003677
Ahy1g2049 468 SUPERFAMILY DNA-binding pseudobarrel domain 244 344 IPR015300 -
Ahy1g2049 468 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 37 343 - -
Ahy1g2049 468 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 352 466 - -
Ahy1g2049 468 ProSiteProfiles B3 DNA-binding domain profile. 291 345 IPR003340 GO:0003677
Ahy1g2049 468 CDD B3_DNA 37 91 IPR003340 GO:0003677
Ahy1g2049 468 MobiDBLite consensus disorder prediction 112 131 - -
Ahy1g2049 468 ProSiteProfiles B3 DNA-binding domain profile. 372 467 IPR003340 GO:0003677
Ahy1g2049 468 Gene3D - 233 346 IPR015300 -
Ahy1g2049 468 Gene3D - 357 468 IPR015300 -
Ahy1g2049 468 MobiDBLite consensus disorder prediction 107 229 - -
Ahy1g2049 468 SUPERFAMILY DNA-binding pseudobarrel domain 37 100 IPR015300 -
Ahy1g2049 468 MobiDBLite consensus disorder prediction 143 162 - -
Ahy1g2049 468 MobiDBLite consensus disorder prediction 177 205 - -
Ahy1g2049 468 SMART B3_2 373 467 IPR003340 GO:0003677
Ahy1g2049 468 SMART B3_2 250 345 IPR003340 GO:0003677
Ahy1g2049 468 ProSiteProfiles B3 DNA-binding domain profile. 30 93 IPR003340 GO:0003677
Ahy1g2049 468 CDD B3_DNA 248 343 IPR003340 GO:0003677
Ahy1g2049 468 Gene3D - 19 94 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2049 Ahy-Chr1 97444441 97447871 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2049 363 458 B3 DNA Binding Superfamily AT3G18990 31.959 4.46e-07 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Ahy1g2049 B3 1.60E-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2049 - - adu:107471893 780.785