Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g2047 ATGATGAGGATGGCAGCAATGTTGTTCTATATGATGGTGTTTGCAACAATATGTTCATCATCATCATCCATGGCAATAACAAGAGAGCAAGAAGAAGATAGAATAAGAGAGCTTCCGGGTCAGCCACGTGTCAGATTCTCACAGTTCTCAGGATATGTAAGTGTAAACAAGAAACATGGTAGAGCACTCTTCTACTGGCTCACTCAGTCTCCCTCTTCTCCCAACAACAAACCTCTTCTTCTCTGGCTCAATGGAGGACCTGGTTGTTCATCAGTAGCATATGGGGCATCAGAGGAAATTGGACCATTCAGGATAAACAAAACTGGTTCTTCTTTATATCTTAACAGATATGCTTGGAACAAAGAAGCAAATATTCTGTTTCTTGAATCACCTGCTGGTGTTGGTTTTTCATACACAAATATCAGCTCTGATCTCCTAACTTCAGGGGACAAAAGAACAGCTCAGGATGCACTGATTTTTCTAGTTAAATGGATGTCAAGATTCCCACAGTATAAATATAGGGACTTTTACATTGCTGGGGAAAGTTATGCAGGTCATTATGTGCCTCAGTTGGCTAAGAAAATCTATGATTATAACAAAGAACATCCCAACATTATTAATCTCAAAGGGTTCATTGTGGGAAATGCTGTGACTGATAACTACCATGATAGCATTGGAACTGTGACATATTGGTGGAGCCATTCAATGATATCAGATCATTCATACAAATCTATCATCAAACATTGTGATTTCAAAGCACAGAACACTTCTCAAGAATGCAATGATGCTGTGAACTATGCAGTCAACAATGAATTTGGAAACATTGATCAATACAGTATCTATACTCCTACATGCCCAGCATCACAAAACAGCACTCTTAGGCGCATAAGGCTAAAGACTACAATGTTTCATATGATTTCTGGCTATGATCCTTGTACTGAAAATTATGCAGAGAAATATTATAATCTTCCTCAAGTGCAGAAAGCAATGCATGCAAATGTTACCAACATTCCTTACAAATGGACTGCTTGCAGTGATGTGCTCCTGAAAAATTGGAAGGACTCTGAATTTTCTATATTGCCCATATACAAAGAGTTAATTGCAGCTGGATTGAGAATATGGGTTTTCAGCGGGGACACAGATTCAGTGGTTCCAGTTACAGCCACAAGGTTTTCACTCAACCATCTCAACCTCACCATTAAAACTCCTTGGTATCCATGGTACTCATCAGGTGGACAGGTAGGTGGATGGACAGAGGTATATGATGGACTGACATTTGCAACAGTGAGAGGAGCTGGACATGAAGTACCACTGTTTCAGCCAGAGAGAGCTCACATTCTTTTCAAGTCATTTTTGGCAGGGAAGAAGCTACCAAAGTCTTGA 1383 0.3984 MMRMAAMLFYMMVFATICSSSSSMAITREQEEDRIRELPGQPRVRFSQFSGYVSVNKKHGRALFYWLTQSPSSPNNKPLLLWLNGGPGCSSVAYGASEEIGPFRINKTGSSLYLNRYAWNKEANILFLESPAGVGFSYTNISSDLLTSGDKRTAQDALIFLVKWMSRFPQYKYRDFYIAGESYAGHYVPQLAKKIYDYNKEHPNIINLKGFIVGNAVTDNYHDSIGTVTYWWSHSMISDHSYKSIIKHCDFKAQNTSQECNDAVNYAVNNEFGNIDQYSIYTPTCPASQNSTLRRIRLKTTMFHMISGYDPCTENYAEKYYNLPQVQKAMHANVTNIPYKWTACSDVLLKNWKDSEFSILPIYKELIAAGLRIWVFSGDTDSVVPVTATRFSLNHLNLTIKTPWYPWYSSGGQVGGWTEVYDGLTFATVRGAGHEVPLFQPERAHILFKSFLAGKKLPKS* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g2047 460 Gene3D alpha/beta hydrolase 29 287 IPR029058 -
Ahy1g2047 460 Gene3D - 312 349 - -
Ahy1g2047 460 Gene3D - 359 454 - -
Ahy1g2047 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 424 437 IPR001563 GO:0004185|GO:0006508
Ahy1g2047 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 138 IPR001563 GO:0004185|GO:0006508
Ahy1g2047 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 115 127 IPR001563 GO:0004185|GO:0006508
Ahy1g2047 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Ahy1g2047 460 ProSitePatterns Serine carboxypeptidases, histidine active site. 424 441 IPR033124 GO:0004185
Ahy1g2047 460 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 12 459 IPR001563 GO:0004185|GO:0006508
Ahy1g2047 460 Pfam Serine carboxypeptidase 40 453 IPR001563 GO:0004185|GO:0006508
Ahy1g2047 460 ProSitePatterns Serine carboxypeptidases, serine active site. 178 185 IPR018202 GO:0004185
Ahy1g2047 460 PANTHER SERINE CARBOXYPEPTIDASE 24 12 459 - -
Ahy1g2047 460 SUPERFAMILY alpha/beta-Hydrolases 30 457 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g2047 Ahy-Chr1 97427126 97430949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g2047 303 457 Calmodulin-binding Proteins AT2G22960 28.846 1.68e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g2047 K16297 - gmx:100783242 788.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2919 11 146821655 146825723 Ahy1g2047 1 97427126 97430949 hybridization