Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy1g2044 | ATGGACTTCAACCACCGAGCTATTGGGGTTACGCCGCCGCCGCCGCCACCGACGCAGTCCTTATACACGGCCTTCCCTCCTCCCCTTCCTTCTCCGGCCATTGCCGTCTACTCCGACCGATTGTTGCGAGGTGAGTTTCTAAACATGGTTTCAATGCCGCTGACCAATGCGGTTGCCGGAGACTCCATGCGGGAACTGGAGAAGGCGCAGATACGGCGAGAAATGATTGCCAGCGGCGTTGCACGGAGGATTCAGCTTGAAGCTGAGGTGAGGAGGGAGCTCGCCTTGGAAGCATTGTTGGGAATTCTTCCAATGCAGAGAGGAAATCTGAGTGAATCAGTGCAGCTGCGGCCACCACCACCACCACCGCCCCCGCCACCGCCACCGCGTCGATCCTTGGTTGAGGAGAGAGTGGCAATGAGTTTGAATAACCCTTTTAATAGTACATTTGCCCCACCAAAATCACAACAGTTGCAGCAACTAATGGCTCCTGTGAAGATAGAGCCTTGTCTTGAAGAGACTAGCAAGAAGGATAAAGTGATCATACTGGGCAAGCCAAACCCAGCTCTCCATTCCGGAAAGCAGAAAGCTGTAATACCCCGGCTTGATGAGCATCATAAACCCAAGGAAGTGTGGAGTTGTGCGCTATGTCAGGTTAGTGCTCCAAATCAGGGAGTCTTTAGTGCACATCTTCAGGGTAGGAAGCACAAGGCCAAGGAAGCATCATTGAGACAACAGAACAATAGTAAGAGCACCGACATGTCAGCGTCGTCAAAGAGAAGAAAGTCTAATGAGTTTACTGCATCCATTGCTGCCACAATATCAAGGTCAAGCGCAGAAGCAGATCAGCAGGTGAAGAATCTAAATATGGTTGATACAGCTAGAGTAGAATCTAAAAAAGAGGAGCAGCCTGAGCAGAACAGGCAAAATATAGAACCTCTGAAGAATAAGAATGGTACAACAACCACCATTGGTGATCAAGCGGAGAGAAGAAATGCATTAAAGAAAATACACGCGAAATTTTGGTGTGAAACGTGTCAGGTTGGAGTTTGGGCAGAAGCTGTGATGGAAGACCACTTGAAAGGGAAAAAGCACCTGAACCAAATGAAGAAACTTGGCGCAAACCATTCGAGTTCCGCATCTTCCGACATCACAAAAAGCTCCTGTCAATTTGATCAAAGATAA | 1185 | 0.4886 | MDFNHRAIGVTPPPPPPTQSLYTAFPPPLPSPAIAVYSDRLLRGEFLNMVSMPLTNAVAGDSMRELEKAQIRREMIASGVARRIQLEAEVRRELALEALLGILPMQRGNLSESVQLRPPPPPPPPPPPPRRSLVEERVAMSLNNPFNSTFAPPKSQQLQQLMAPVKIEPCLEETSKKDKVIILGKPNPALHSGKQKAVIPRLDEHHKPKEVWSCALCQVSAPNQGVFSAHLQGRKHKAKEASLRQQNNSKSTDMSASSKRRKSNEFTASIAATISRSSAEADQQVKNLNMVDTARVESKKEEQPEQNRQNIEPLKNKNGTTTTIGDQAERRNALKKIHAKFWCETCQVGVWAEAVMEDHLKGKKHLNQMKKLGANHSSSASSDITKSSCQFDQR* | 395 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy1g2044 | 394 | SUPERFAMILY | beta-beta-alpha zinc fingers | 326 | 372 | IPR036236 | - | |
| Ahy1g2044 | 394 | MobiDBLite | consensus disorder prediction | 294 | 308 | - | - | |
| Ahy1g2044 | 394 | PANTHER | OS06G0651300 PROTEIN | 1 | 385 | - | - | |
| Ahy1g2044 | 394 | SUPERFAMILY | beta-beta-alpha zinc fingers | 184 | 247 | IPR036236 | - | |
| Ahy1g2044 | 394 | Gene3D | Classic Zinc Finger | 324 | 371 | - | - | |
| Ahy1g2044 | 394 | MobiDBLite | consensus disorder prediction | 112 | 131 | - | - | |
| Ahy1g2044 | 394 | MobiDBLite | consensus disorder prediction | 294 | 327 | - | - | |
| Ahy1g2044 | 394 | MobiDBLite | consensus disorder prediction | 309 | 327 | - | - | |
| Ahy1g2044 | 394 | MobiDBLite | consensus disorder prediction | 115 | 131 | - | - | |
| Ahy1g2044 | 394 | PANTHER | OS06G0651300 PROTEIN-RELATED | 1 | 385 | - | - | |
| Ahy1g2044 | 394 | MobiDBLite | consensus disorder prediction | 371 | 394 | - | - | |
| Ahy1g2044 | 394 | SMART | ZnF_U1_5 | 338 | 372 | IPR003604 | GO:0003676|GO:0008270 | |
| Ahy1g2044 | 394 | SMART | ZnF_U1_5 | 209 | 243 | IPR003604 | GO:0003676|GO:0008270 | |
| Ahy1g2044 | 394 | MobiDBLite | consensus disorder prediction | 231 | 264 | - | - | |
| Ahy1g2044 | 394 | Pfam | Zinc-finger of C2H2 type | 341 | 365 | - | - | |
| Ahy1g2044 | 394 | Pfam | Zinc-finger of C2H2 type | 212 | 236 | - | - | |
| Ahy1g2044 | 394 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 119 | 128 | - | - | |
| Ahy1g2044 | 394 | Gene3D | Classic Zinc Finger | 203 | 249 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ahy1g2044 | Ahy-Chr1 | 97409745 | 97412038 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Ahy1g2044 | 171 | 370 | C2H2 Transcription Factor Family | AT5G61190 | 26.923 | 2.60e-08 | 54.3 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Ahy11g2922 | 11 | 146838885 | 146841277 | Ahy1g2044 | 1 | 97409745 | 97412038 | hybridization |