Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy1g2021 | ATGGGAAAGGCATCACAAGTTAACAAGAATAATAATCATAATCTTAGTGTAATCAATGGCAGTACTACCAAGGTGAAACGTACGAGGAGGAGTGTCCCTAGAGACTCTCCACCTCAAAGAAGCTCGATTTACAGAGGAGTCACTCGGCATAGGTGGACGGGAAGATATGAAGCTCATCTGTGGGACAAGAATTGCTGGAATGAGTCTCAGAACAAGAAGGGACGACAAGTCTACCTTGGTGCTTATGACGATGAAGAGGCCGCAGCACATGCTTATGATCTAGCAGCACTTAAATACTGGGGTCAAGATACCATTCTCAATTTTCCGGTATCGAAGTACCAGAATGAATTGAAAGAAATGGAGGGTCAATCAAGGGAGGAGTATATTGGATCACTAAGGAGGAAAAGCAGTGGATTTTCCCGGGGAGTTTCTAAATATAGAGGTGTTGCAAGACATCATCATAACGGAAGATGGGAGGCTCGGATAGGCAGAGTTTTTGGGAATAAATATCTCTATCTTGGAACTTATGCTACACAAGAAGAAGCTGCCACTGCCTATGACATGGCTGCTATTGAATACCGTGGACTTAACGCCGTCACCAATTTCGATCTCAGCCGTTACATTAAGTGGCTTAAGCCTAACAATAACAGCAACGAAAATGATCATAATAATAATAATAATAACAACAGGATTAGTTTTAATCTTGCTGCTGCTGTTGCCGTTGATTACGTTAACCCTAATTGCAATAACACCAACTTCACACCAAACTTCAATAATAATAGCCTCTTCAACCACGAACCATTATTCATTAATAATAATAATATTGATAATAATAATAATAATGGAAGTAAGTTGGGTCAGGCTCGACCTGGTGCCACGTCAGCCCTAGAGCTTCTGCTTCAGTCGTCCAAGTTTAAGGAAATGATGGAGATGACGTCATCAGTGGCGAATAATAATAATAATAATCCATCAACACCAGCAGAGTGTAGTGATGAGTTGCCACAGTGCAATTTCCCTGACGACATTCAAACTTATTTTGAGTATGAAGATTCAAATAAGTATGAAGAAGGAGATCATGATACGTTGTTCAACGAGATCCACTCATTTGTGCCAATGTTCCACTGCGATGACTTCGAGAATTGA | 1143 | 0.4068 | MGKASQVNKNNNHNLSVINGSTTKVKRTRRSVPRDSPPQRSSIYRGVTRHRWTGRYEAHLWDKNCWNESQNKKGRQVYLGAYDDEEAAAHAYDLAALKYWGQDTILNFPVSKYQNELKEMEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLKPNNNSNENDHNNNNNNNRISFNLAAAVAVDYVNPNCNNTNFTPNFNNNSLFNHEPLFINNNNIDNNNNNGSKLGQARPGATSALELLLQSSKFKEMMEMTSSVANNNNNNPSTPAECSDELPQCNFPDDIQTYFEYEDSNKYEEGDHDTLFNEIHSFVPMFHCDDFEN* | 381 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy1g2021 | 380 | PRINTS | Ethylene responsive element binding protein signature | 44 | 55 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy1g2021 | 380 | PRINTS | Ethylene responsive element binding protein signature | 185 | 205 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy1g2021 | 380 | Gene3D | AP2/ERF domain | 144 | 205 | IPR036955 | GO:0003700|GO:0006355 | |
Ahy1g2021 | 380 | Gene3D | AP2/ERF domain | 43 | 111 | IPR036955 | GO:0003700|GO:0006355 | |
Ahy1g2021 | 380 | MobiDBLite | consensus disorder prediction | 1 | 42 | - | - | |
Ahy1g2021 | 380 | Pfam | AP2 domain | 144 | 195 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy1g2021 | 380 | Pfam | AP2 domain | 43 | 101 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy1g2021 | 380 | SMART | rav1_2 | 145 | 209 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy1g2021 | 380 | SMART | rav1_2 | 43 | 115 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy1g2021 | 380 | PANTHER | AP2 DOMAIN-CONTAINING TRANSCRIPTION FACTOR | 1 | 365 | - | - | |
Ahy1g2021 | 380 | SUPERFAMILY | DNA-binding domain | 144 | 205 | IPR016177 | GO:0003677 | |
Ahy1g2021 | 380 | CDD | AP2 | 42 | 111 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy1g2021 | 380 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Ahy1g2021 | 380 | ProSiteProfiles | AP2/ERF domain profile. | 43 | 109 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy1g2021 | 380 | CDD | AP2 | 144 | 205 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy1g2021 | 380 | SUPERFAMILY | DNA-binding domain | 42 | 111 | IPR016177 | GO:0003677 | |
Ahy1g2021 | 380 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 1 | 365 | - | - | |
Ahy1g2021 | 380 | ProSiteProfiles | AP2/ERF domain profile. | 145 | 203 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy1g2021 | Ahy-Chr1 | 97179131 | 97181645 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy1g2021 | 3 | 207 | AP2-EREBP Transcription Factor Family | AT5G57390 | 64.878 | 1.57e-91 | 280 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-AP2 | Ahy1g2021 | AP2 | 7.90E-13 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy1g2021 | K09285 | - | gmx:100804555 | 486.493 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy11g2953 | 11 | 147112718 | 147115625 | Ahy1g2021 | 1 | 97179131 | 97181645 | hybridization |