Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1999 ATGCGTAATCAAAGGTCGGTGAAGCAAGAATTCCTGCGGAAATGGATAACAGGTCTTAGAAGATACAGCTGTGATGAGAAGAAGAACATGAGCTTCTTGGAGAGAAAGAAAGCCATAAAGCTCTCTGCAGATATAGCCATGGCTTCCACCAGGGACAAAACCACACGCTGGAGCCAGGCTCTTATTGCCAACGCTTCCAGTTCCGGAGACACGTTAACAGGATCCTCAAAGAACAATAGCAGCAGAAGCAGAAAGAAGATGTTGATGATGAGAAGGAGAAGGCCGAAGGTGAAGAGCGCGAAGAAGGAGATGTCAGCGAGTTGCATCGCCAAGAGGTTGGTGGAGAAGAGAACAAGAAAGCTGAAGAATCTGTTGCCAGGTGGAGAATCGATTGATGAGGGATGTTTGGTTGAAGAAACCCTAGATTACATAGAATCCCTCAGAGCTCAAATTGAAGTTATGAGATACCTTGTCACTGCATCTCAACTCATCATAAATCCATATCCTTGA 510 0.4529 MRNQRSVKQEFLRKWITGLRRYSCDEKKNMSFLERKKAIKLSADIAMASTRDKTTRWSQALIANASSSGDTLTGSSKNNSSRSRKKMLMMRRRRPKVKSAKKEMSASCIAKRLVEKRTRKLKNLLPGGESIDEGCLVEETLDYIESLRAQIEVMRYLVTASQLIINPYP* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1999 169 MobiDBLite consensus disorder prediction 67 83 - -
Ahy1g1999 169 MobiDBLite consensus disorder prediction 67 101 - -
Ahy1g1999 169 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 5 160 IPR044660 GO:0006355
Ahy1g1999 169 MobiDBLite consensus disorder prediction 84 99 - -
Ahy1g1999 169 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 5 160 - -
Ahy1g1999 169 CDD bHLH_AtIBH1_like 106 158 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1999 Ahy-Chr1 96939360 96940283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1999 1 162 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30410 40.110 1.78e-26 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1999 - - gmx:100814789 185.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2976 11 147332932 147333880 Ahy1g1999 1 96939360 96940283 hybridization