Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1990 ATGCTATCTCGATCTTGCTTAGGGCTATTGAATTTGGTATCGGTGGATGATTACCAGGCACTGAGCCGCGTACCCAGCCTCATGGCGGTTCCGGGAGAACCCACCCGGGACTCATATCAGATCAGCCGTGACGGCCTCTCCAGCGGCGGATCCGACGACGCCGTTTCCCCTCCCCCTCAAGAACGCAGAATCATCGTTGCGAACCAACTCCCTATAAAAGCCACGCGCGATTCAGACACGAAGAAATGGATCTTCGAGTACGACGCCGACAGCCTGTATCTGCAGCTGAAGGACGGGTTCCCCTCCGACGTGGAGGTCCTGTACGTAGGGTCCCTGAAGGCCGACGTGGAGGCTTCCGAGCAGGACGAGGTGTCGCAGGTGCTCCTAGAGCGGTTCCGGTGCGTGCCCACCTTCCTCCCTTGGGAAATTCAGAACAAATTCTACCATGGATTCTGCAAGCACTATCTGTGGCCCCTGTTCCATTACATGCTTCCCATGTCTCCTAGCCACGGCGCCCGCTTCGACCGCGCCCAGTGGCAGGCCTACGTCCTGGCCAACAAGATCTTCGCCGATAAGGTGACGGAGGTCATAAACCCCGACGAGGATTTCGTGTGGGTTCACGATTACCACCTGATGATACTGCCCACTTTCTTGAGGAAAAGGTTCCACCGCGTGAAGCTAGGATTCTTCTTGCACAGCCCCTTCCCTTCTTCGGAAATCTACAGGACTCTACCTGTTCGTGATGACATACTGAGAGCCTTCTTGAATTGCGACCTGGTTGGTTTCCACACCTTCGATTACGCCAGGCACTTCTTGTCTTGCTGCAGCAGGATGCTTGGTTTGGACTACGAGTCTAAAAGAGGTTACATTGGCTTGGATTATTATGGAAGAACCGTCACTATAAAGATTCTCCCCGTTGGGATTCACATGGGGCAGCTTCGCTCCGTGTTGTCTCTGCCGCGCACGGCCAAGAGGGTGGAGGAGTTGAAGGTGGAGTATGAGGGCAAGGTTGTCATTCTTGGCGTCGATGACATGGACTTGTTCAAAGGTATCAGCTTGAAGTTCTTGGCAATGGGGCAGCTTCTTGAGGTGCATGAGGCCTTGAGAGGGAAGGTTGTGTTGGTTCAGATTCTGAACCCTGCCAGGAGCTCAGGGAAGGATATTCAAGACGTCAAGAATGAGTCGGAGGCCCTTGCTAAGGAGATTAACGACAAATATGGTAGGCCCGGTTACCAGCCAATTGTGTTTGTGAATGGTCCAGTTTCAACGGAGGATAAGGCTGCTTACTATGCAATTTCCGAGTGTTGTGTGGTGAATGCGGTGAGGGATGGCATGAACTTGGTGCCTTACACATACACCGTTTGCAGGCAGATAGTTGAGAGTGAGAGGCCTAATCAGAGTGTTATCATTGTATCTGAGTTCATCGGTTGCTCCCCCTCCCTCAGCGGAGCAATCAGGGTCAATCCTTGGAACATTGATGATGTCTCCGAGGCTATGAACTCTGCCATCACAATGCCGGACGGGGAGAAGCATTTGCGCCACGAGAAGCATTACAAGTACATAAGCTCCCATGATGTGGCCTATTGGGCCAGGAGTTTTGATCAGGATTTGGAGAGGGCTTGCAGGGAGCATTACCTCAAGAGGTATTGGGGTGTTGGTTTTGGTCTTGGATTCAGGATCGTTGCTTTGGATCCTACCTTTAGGAAGCTCTCAGTCGATAACATTGTCTCTGCATACAAAGCTACACACAGCCGCTTGATCCTTTTGGACTATGATGGCACTATGTTGCCTCAGGCATCCATAAACAAGACCCCAAGTCCTGAGGTTCTATCTGTATTGAACTATTTATGCAGTGATCCCAAGAATATGGTGTTCATTGTGAGTGGCAGAGACAAGGATTGCCTCAGCAAGTGGTTTGATCCTTGTGACAAGTTGGGCCTCTCAGCAGAACATGGTTACTTCACTAGGTTGAGGAGGGATACTCCTTGGGAGACATGCGGGTTGACAACTGATTTTGACTGGAAGAAGATGGCAGAACCTGTGATGGCGCATTACACAGAGGCAACGGATGGTTCTTTCATTGAACACAAGGAGAGTGCAATGGTTTGGCACCATCAAGAAGCCGATCCTTATTTTGGATCATGCCAAGCCAAAGAGCTTCTTGATCACCTTGAGAATGTGCTGGCCAATGAGCCTGTAGTTGTTAAAAGGGGACAACACATAGTTGAAGTGAAACCTCAGGGTGTGAGCAAGGGTATAGTTGTGGAGAATCTAATCTCAAGCATGAGGAGTGAGGGTAAATCACCAGATTTTCTGTTGTGCATTGGGGATGATCGATCAGATGAAGACATGTTCGAAAGCATTGCACGTTCAGTTTCTAATCCAGCACTTCCAACAATATCACAAGTGTTTGCATGCACGGTTGGCCAGAAACCAAGCATGGCAAAGTACTATTTGGAGGATACTAGTGAAGTTATCAAATTGCTACAAGGACTTGCTACTGCATCAGCACCCTCAGCTTTTCAAGAATCGCAACAAGGATCACTATAG 2550 0.5004 MLSRSCLGLLNLVSVDDYQALSRVPSLMAVPGEPTRDSYQISRDGLSSGGSDDAVSPPPQERRIIVANQLPIKATRDSDTKKWIFEYDADSLYLQLKDGFPSDVEVLYVGSLKADVEASEQDEVSQVLLERFRCVPTFLPWEIQNKFYHGFCKHYLWPLFHYMLPMSPSHGARFDRAQWQAYVLANKIFADKVTEVINPDEDFVWVHDYHLMILPTFLRKRFHRVKLGFFLHSPFPSSEIYRTLPVRDDILRAFLNCDLVGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLDYYGRTVTIKILPVGIHMGQLRSVLSLPRTAKRVEELKVEYEGKVVILGVDDMDLFKGISLKFLAMGQLLEVHEALRGKVVLVQILNPARSSGKDIQDVKNESEALAKEINDKYGRPGYQPIVFVNGPVSTEDKAAYYAISECCVVNAVRDGMNLVPYTYTVCRQIVESERPNQSVIIVSEFIGCSPSLSGAIRVNPWNIDDVSEAMNSAITMPDGEKHLRHEKHYKYISSHDVAYWARSFDQDLERACREHYLKRYWGVGFGLGFRIVALDPTFRKLSVDNIVSAYKATHSRLILLDYDGTMLPQASINKTPSPEVLSVLNYLCSDPKNMVFIVSGRDKDCLSKWFDPCDKLGLSAEHGYFTRLRRDTPWETCGLTTDFDWKKMAEPVMAHYTEATDGSFIEHKESAMVWHHQEADPYFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVENLISSMRSEGKSPDFLLCIGDDRSDEDMFESIARSVSNPALPTISQVFACTVGQKPSMAKYYLEDTSEVIKLLQGLATASAPSAFQESQQGSL* 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1990 849 MobiDBLite consensus disorder prediction 32 58 - -
Ahy1g1990 849 Gene3D Glycogen Phosphorylase B; 57 315 - -
Ahy1g1990 849 Pfam Glycosyltransferase family 20 62 538 IPR001830 GO:0003824|GO:0005992
Ahy1g1990 849 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 586 790 IPR006379 -
Ahy1g1990 849 TIGRFAM T6PP: trehalose-phosphatase 584 833 IPR003337 GO:0003824|GO:0005992
Ahy1g1990 849 CDD GT20_TPS 62 538 IPR001830 GO:0003824|GO:0005992
Ahy1g1990 849 Gene3D - 584 701 IPR023214 -
Ahy1g1990 849 Gene3D - 714 846 IPR023214 -
Ahy1g1990 849 Pfam Trehalose-phosphatase 588 823 IPR003337 GO:0003824|GO:0005992
Ahy1g1990 849 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 11-RELATED 1 838 - -
Ahy1g1990 849 SUPERFAMILY HAD-like 585 833 IPR036412 -
Ahy1g1990 849 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 838 IPR001830 GO:0003824|GO:0005992
Ahy1g1990 849 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 62 542 - -
Ahy1g1990 849 CDD HAD_TPP 586 827 - -
Ahy1g1990 849 Gene3D Glycogen Phosphorylase B; 316 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1990 Ahy-Chr1 96804545 96807915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1990 10 848 Trehalose Biosynthesis Gene Families AT2G18700 67.765 0.0 1193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1990 K16055 - gmx:100810498 1440.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2988 11 147446872 147450260 Ahy1g1990 1 96804545 96807915 hybridization